SCOPe 2.08: Domain d1u10b_: 1u10 B:

Lineage for d1u10b_ (1u10 B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.65: Hedgehog/DD-peptidase [55165] (1 superfamily)
   alpha-beta(2)-alpha-beta(2); 2 layers: alpha/beta

4. Superfamily d.65.1: Hedgehog/DD-peptidase [55166] (5 families)
   zinc-binding motif

5. Family d.65.1.3: MepA-like [111019] (1 protein)
   automatically mapped to Pfam PF03411

6. Protein D-alanyl-D-alanine-endopeptidase MepA [111020] (1 species)

7. Species Escherichia coli [TaxId:562] [111021] (2 PDB entries)
   Uniprot P14007

8. Domain d1u10b_: 1u10 B: [107571]
   complexed with so4, zn

Details for d1u10b_

PDB Entry: 1u10, 2.4 Å

PDB Description: MEPA, active form with ZN in P1

PDB Compounds: (B:) Penicillin-insensitive murein endopeptidase

SCOPe Domain Sequences for d1u10b_:

Sequence, based on SEQRES records:

>d1u10b_ d.65.1.3 (B:) D-alanyl-D-alanine-endopeptidase MepA {Escherichia coli [TaxId: 562]}
atpwqkitqpvpgsaqsigsfsngcivgadtlpiqsehyqvmrtdqrryfghpdlvmfiq
rlssqvsnlgmgtvligdmgmpaggrfngghashqtgldvdiflqlpktrwtsaqllrpq
aldlvsrdgkhvvstlwkpeifsliklaaqdkdvtrifvnpaikqqlcldagtdrdwlrk
vrpwfqhrahmhvrlrcpadslecedqplppsgdgcgaelqswfeppkpgttkpekktpp
plppscqalldehvi

Sequence, based on observed residues (ATOM records):

>d1u10b_ d.65.1.3 (B:) D-alanyl-D-alanine-endopeptidase MepA {Escherichia coli [TaxId: 562]}
atpwqkitqpvpgsaqsigsfsngcivgadtlpiqsehyqvmrtdqrryfghpdlvmfiq
rlssqvsnlgmgtvligdmgmpaggrfngghashqtgldvdiflqlpktrwtsaqllrpq
aldlvsrdgkhvvstlwkpeifsliklaaqdkdvtrifvnpaikqqlcldagtdrdwlrk
vrpwfqhrahmhvrlrcpadslecedqplppsgdgcgaelqswfelppscqalldehvi

Timeline for d1u10b_:

• d1u10b_ first appeared in SCOP 1.69
  
• d1u10b_ appears in SCOPe 2.07