Lineage for d1twid2 (1twi D:50-313)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2080829Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 2080830Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (4 protein domains)
  6. 2080865Protein Diaminopimelate decarboxylase LysA [89457] (3 species)
    most similar to eukaryotic ODC
  7. 2080869Species Methanococcus jannaschii [TaxId:2190] [110347] (2 PDB entries)
    Uniprot Q58497
  8. 2080873Domain d1twid2: 1twi D:50-313 [107406]
    Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1
    Structural genomics target
    complexed with lys, mg, plp

Details for d1twid2

PDB Entry: 1twi (more details), 2 Å

PDB Description: Crystal structure of Diaminopimelate Decarboxylase from m. jannaschii in co-complex with L-lysine
PDB Compounds: (D:) diaminopimelate decarboxylase

SCOPe Domain Sequences for d1twid2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1twid2 c.1.6.1 (D:50-313) Diaminopimelate decarboxylase LysA {Methanococcus jannaschii [TaxId: 2190]}

SCOPe Domain Coordinates for d1twid2:

Click to download the PDB-style file with coordinates for d1twid2.
(The format of our PDB-style files is described here.)

Timeline for d1twid2: