SCOPe 2.08: Domain d1tlyb_: 1tly B:

Lineage for d1tlyb_ (1tly B:)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
   not a true fold, gathers together transmembrane barrels of different (n,S)
   annotated by the SCOP(e) curators as 'not a true fold'

4. Superfamily f.4.6: Tsx-like channel [111364] (1 family)
   forms (12,16) barrel
   automatically mapped to Pfam PF03502

5. Family f.4.6.1: Tsx-like channel [111365] (1 protein)
   Pfam PF03502

6. Protein Nucleoside-specific channel-forming protein tsx (NupA) [111366] (1 species)

7. Species Escherichia coli [TaxId:562] [111367] (3 PDB entries)
   Uniprot P22786

8. Domain d1tlyb_: 1tly B: [107144]
   Other proteins in same PDB: d1tlya2

Details for d1tlyb_

PDB Entry: 1tly, 3.01 Å

PDB Description: Tsx structure

PDB Compounds: (B:) Nucleoside-specific channel-forming protein tsx

SCOPe Domain Sequences for d1tlyb_:

Sequence, based on SEQRES records:

>d1tlyb_ f.4.6.1 (B:) Nucleoside-specific channel-forming protein tsx (NupA) {Escherichia coli [TaxId: 562]}
lsdwwhqsvnvvgsyhtrfgpqirndtyleyeafakkdwfdfygyadapvffggnsdakg
iwnhgsplfmeieprfsidkltntdlsfgpfkewyfannyiydmgrnkdgrqstwymglg
tdidtglpmslsmnvyakyqwqnygaanenewdgyrfkikyfvpitdlwggqlsyigftn
fdwgsdlgddsgnaingiktrtnnsiasshilalnydhwhysvvarywhdggqwnddael
nfgngnfnvrstgwggylvvgynf

Sequence, based on observed residues (ATOM records):

>d1tlyb_ f.4.6.1 (B:) Nucleoside-specific channel-forming protein tsx (NupA) {Escherichia coli [TaxId: 562]}
lsdwwhqsvnvvgsyhtrfgpqirndtyleyeafakkdwfdfygyadapvplfmeieprf
sidkltntdlsfgpfkewyfannyiydmgrnkdgrqstwymglgtdidtglpmslsmnvy
akyqwqnygaanenewdgyrfkikyfvpitdlwggqlsyigftnfdwgsdlgddsgnain
giktrtnnsiasshilalnydhwhysvvarywhdggqwnddaelnfgngnfnvrstgwgg
ylvvgynf

Timeline for d1tlyb_:

• d1tlyb_ first appeared in SCOP 1.69
  
• d1tlyb_ appears in SCOPe 2.07