SCOPe 2.08: Domain d1tk1a_: 1tk1 A:

Lineage for d1tk1a_ (1tk1 A:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.248: Coproporphyrinogen III oxidase [102885] (2 superfamilies)
   alpha-beta(6)-alpha(2)-beta-alpha(n); 3 layers alpha/beta/alpha; antiparallel sheet: order 1234567

4. Superfamily d.248.1: Coproporphyrinogen III oxidase [102886] (2 families)
   automatically mapped to Pfam PF01218

5. Family d.248.1.1: Coproporphyrinogen III oxidase [102887] (3 proteins)
   Pfam PF01218

6. Protein Coproporphyrinogen III oxidase [110896] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110897] (4 PDB entries)
   Uniprot P11353

8. Domain d1tk1a_: 1tk1 A: [107066]
   C-terminal part is disordered in the crystal; alternative dimerisation mode (cf. 1TXN)

Details for d1tk1a_

PDB Entry: 1tk1, 1.9 Å

PDB Description: yeast oxygen-dependent coproporphyrinogen oxidase

PDB Compounds: (A:) Coproporphyrinogen III oxidase

SCOPe Domain Sequences for d1tk1a_:

Sequence, based on SEQRES records:

>d1tk1a_ d.248.1.1 (A:) Coproporphyrinogen III oxidase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
rnlpirqqmealirrkqaeitqglesidtvkfhadtwtrgndggggtsmviqdgttfekg
gvnvsvvygqlspaavsamkadhknlrlpedpktglpvtdgvkffacglsmvihpvnpha
ptthlnyryfetwnqdgtpqtwwfgggadltpsylyeedgqlfhqlhkdaldkhdtalyp
rfkkwcdeyfyithrketrgiggiffddyderdpqeilkmvedcfdaflpsyltivkrrk
dmpytkeeqqwqairrgr

Sequence, based on observed residues (ATOM records):

>d1tk1a_ d.248.1.1 (A:) Coproporphyrinogen III oxidase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
rnlpirqqmealirrkqaeitqglesidtvkfhagggtsmviqdgttfekggvnvsvvyg
qlspaavsamkadhkdgvkffacglsmvihpvnphaptthlnyryfetwnqdgtpqtwwf
gggadltpsylyeedgqlfhqlhkdaldkhdtalyprfkkgiggiffddyderdpqeilk
mvedcfdaflpsyltivkrrkdmpytkeeqqwqairrgr

Timeline for d1tk1a_:

• d1tk1a_ first appeared in SCOP 1.69
  
• d1tk1a_ appears in SCOPe 2.07