Lineage for d1thdc2 (1thd C:1-297)

  1. Root: SCOP 1.71
  2. 619386Class f: Membrane and cell surface proteins and peptides [56835] (49 folds)
  3. 619774Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
    2 intertwined domains; all-beta and alpha+beta
  4. 619775Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (1 family) (S)
  5. 619776Family f.10.1.1: Viral glycoprotein, central and dimerisation domains [56984] (2 proteins)
  6. 619777Protein Envelope glycoprotein [56985] (2 species)
  7. 619778Species Dengue virus type 2 [TaxId:12637] [90131] (6 PDB entries)
  8. 619787Domain d1thdc2: 1thd C:1-297 [106915]
    Other proteins in same PDB: d1thda1, d1thdb1, d1thdc1

Details for d1thdc2

PDB Entry: 1thd (more details), 9.5 Å

PDB Description: complex organization of dengue virus e protein as revealed by 9.5 angstrom cryo-em reconstruction

SCOP Domain Sequences for d1thdc2:

Sequence, based on SEQRES records: (download)

>d1thdc2 f.10.1.1 (C:1-297) Envelope glycoprotein {Dengue virus type 2}
mrcigisnrdfvegvsggswvdivlehgscvttmaknkptldfelikteakqpatlrkyc
ieakltntttdsrcptqgeptlneeqdkrfvckhsmvdrgwgngcglfgkggivtcamft
ckknmegkivqpenleytvvitphsgeehavgndtgkhgkevkitpqssiteaeltgygt
vtmecsprtgldfnemvllqmkdkawlvhrqwfldlplpwlpgadtqgsnwiqketlvtf
knphakkqdvvvlgsqegamhtaltgateiqmssgnllftghlkcrlrmdklqlkgm

Sequence, based on observed residues (ATOM records): (download)

>d1thdc2 f.10.1.1 (C:1-297) Envelope glycoprotein {Dengue virus type 2}
mrcigisnrdfvegvsswvdivlehgscvttmaknkptldfelikteakqpatlrkycie
akltntttdsrcptqgeptlneeqdkrfvckhsmvdrgwgngcglfgkggivtcamftck
knmegkivqpenleytvvitphsgeehavgndtgkhgkevkitpqssiteaeltgygtvt
mecsprtgldfnemvllqmkdkawlvhrqwfldlplpwlpgagsnwiqketlvtfknpha
kkqdvvvlgsqegamhtaltgateiqmssgnllftghlkcrlrmdklqlkgm

SCOP Domain Coordinates for d1thdc2:

Click to download the PDB-style file with coordinates for d1thdc2.
(The format of our PDB-style files is described here.)

Timeline for d1thdc2: