Lineage for d1thdb2 (1thd B:1-297)

  1. Root: SCOP 1.69
  2. 519077Class f: Membrane and cell surface proteins and peptides [56835] (47 folds)
  3. 519458Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
    2 intertwined domains; all-beta and alpha+beta
  4. 519459Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (1 family) (S)
  5. 519460Family f.10.1.1: Viral glycoprotein, central and dimerisation domains [56984] (2 proteins)
  6. 519461Protein Envelope glycoprotein [56985] (2 species)
  7. 519462Species Dengue virus type 2 [TaxId:12637] [90131] (6 PDB entries)
  8. 519470Domain d1thdb2: 1thd B:1-297 [106913]
    Other proteins in same PDB: d1thda1, d1thdb1, d1thdc1

Details for d1thdb2

PDB Entry: 1thd (more details), 9.5 Å

PDB Description: complex organization of dengue virus e protein as revealed by 9.5 angstrom cryo-em reconstruction

SCOP Domain Sequences for d1thdb2:

Sequence, based on SEQRES records: (download)

>d1thdb2 f.10.1.1 (B:1-297) Envelope glycoprotein {Dengue virus type 2}
mrcigisnrdfvegvsggswvdivlehgscvttmaknkptldfelikteakqpatlrkyc
ieakltntttdsrcptqgeptlneeqdkrfvckhsmvdrgwgngcglfgkggivtcamft
ckknmegkivqpenleytvvitphsgeehavgndtgkhgkevkitpqssiteaeltgygt
vtmecsprtgldfnemvllqmkdkawlvhrqwfldlplpwlpgadtqgsnwiqketlvtf
knphakkqdvvvlgsqegamhtaltgateiqmssgnllftghlkcrlrmdklqlkgm

Sequence, based on observed residues (ATOM records): (download)

>d1thdb2 f.10.1.1 (B:1-297) Envelope glycoprotein {Dengue virus type 2}
mrcigisnrdfvegvsswvdivlehgscvttmaknkptldfelikteakqpatlrkycie
akltntttdsrcptqgeptlneeqdkrfvckhsmvdrgwgngcglfgkggivtcamftck
knmegkivqpenleytvvitphsgeehavgndtgkhgkevkitpqssiteaeltgygtvt
mecsprtgldfnemvllqmkdkawlvhrqwfldlplpwlpgagsnwiqketlvtfknpha
kkqdvvvlgsqegamhtaltgateiqmssgnllftghlkcrlrmdklqlkgm

SCOP Domain Coordinates for d1thdb2:

Click to download the PDB-style file with coordinates for d1thdb2.
(The format of our PDB-style files is described here.)

Timeline for d1thdb2: