Lineage for d1thdb1 (1thd B:298-395)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2352459Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2375023Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2375406Family b.1.18.4: Class II viral fusion proteins C-terminal domain [81284] (3 proteins)
  6. 2375407Protein Envelope glycoprotein [49213] (5 species)
  7. 2375408Species Dengue virus type 2 [TaxId:11060] [89194] (10 PDB entries)
    Uniprot P12823 281-675 # 99% sequence identity
  8. 2375420Domain d1thdb1: 1thd B:298-395 [106912]
    Other proteins in same PDB: d1thda2, d1thdb2, d1thdc2

Details for d1thdb1

PDB Entry: 1thd (more details), 9.5 Å

PDB Description: complex organization of dengue virus e protein as revealed by 9.5 angstrom cryo-em reconstruction
PDB Compounds: (B:) major envelope protein E

SCOPe Domain Sequences for d1thdb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1thdb1 b.1.18.4 (B:298-395) Envelope glycoprotein {Dengue virus type 2 [TaxId: 11060]}

SCOPe Domain Coordinates for d1thdb1:

Click to download the PDB-style file with coordinates for d1thdb1.
(The format of our PDB-style files is described here.)

Timeline for d1thdb1: