SCOPe 2.05: Domain d1tf5a3: 1tf5 A:1-226,A:349-395

Lineage for d1tf5a3 (1tf5 A:1-226,A:349-395)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.19: Tandem AAA-ATPase domain [81268] (24 proteins)
   duplication: tandem repeat of two RecA-like (AAA) domains

6. Protein Translocation ATPase SecA, nucleotide-binding domains [82414] (3 species)
   a pre-protein crosslinking domain inserted in the first AAA domain

7. Species Bacillus subtilis [TaxId:1423] [82415] (4 PDB entries)
   Uniprot P28366

8. Domain d1tf5a3: 1tf5 A:1-226,A:349-395 [106836]
   Other proteins in same PDB: d1tf5a1, d1tf5a2

Details for d1tf5a3

PDB Entry: 1tf5, 2.18 Å

PDB Description: Crystal structure of SecA in an open conformation from Bacillus Subtilis

PDB Compounds: (A:) Preprotein translocase secA subunit

SCOPe Domain Sequences for d1tf5a3:

Sequence, based on SEQRES records:

>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
mlgilnkmfdptkrtlnryekiandidairgdyenlsddalkhktiefkerlekgattdd
llveafavvreasrrvtgmfpfkvqlmggvalhdgniaemktgegktltstlpvylnalt
gkgvhvvtvneylasrdaeqmgkifeflgltvglnlnsmskdekreayaaditystnnel
gfdylrdnmvlykeqmvqrplhfavidevdsilideartpliisgqXsmtlatitfqnyf
rmyeklagmtgtakteeeefrniynmqvvtiptn

Sequence, based on observed residues (ATOM records):

>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
mlgilnkrtlnryekiandidairgdyenlsddalkhktiefkerlekgattddllveaf
avvreasrrvtgmfpfkvqlmggvalhdgniaemktgegktltstlpvylnaltgkgvhv
vtvneylasrdaeqmgkifeflgltvglnlnsmskdekreayaaditystnnelgfdylr
dnmvlykeqmvqrplhfavidevdsilideartpliisgqXsmtlatitfqnyfrmyekl
agmtgtakteeeefrniynmqvvtiptn

Timeline for d1tf5a3:

• d1tf5a3 first appeared in SCOP 1.69
  
• d1tf5a3 appears in SCOPe 2.04
  
• d1tf5a3 appears in SCOPe 2.06
  
• d1tf5a3 appears in the current release, SCOPe 2.08