SCOPe 2.06: Domain d1szpf2: 1szp F:145-395

Lineage for d1szpf2 (1szp F:145-395)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (21 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein DNA repair protein Rad51, catalytic domain [82412] (7 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110554] (2 PDB entries)
   Uniprot P25454 81-395

8. Domain d1szpf2: 1szp F:145-395 [106187]
   Other proteins in same PDB: d1szpa1, d1szpb1, d1szpc1, d1szpd1, d1szpe1, d1szpf1
   complexed with so4

Details for d1szpf2

PDB Entry: 1szp, 3.25 Å

PDB Description: a crystal structure of the rad51 filament

PDB Compounds: (F:) DNA repair protein rad51

SCOPe Domain Sequences for d1szpf2:

Sequence, based on SEQRES records:

>d1szpf2 c.37.1.11 (F:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
vtaadfhmrrseliclttgsknldtllgggvetgsitelfgefrtgksqlchtlavtcqi
pldigggegkclyidtegtfrpvrlvsiaqrfgldpddalnnvayaraynadhqlrllda
aaqmmsesrfslivvdsvmalyrtdfsgrgelsarqmhlakfmralqrladqfgvavvvt
nqvvaqvdggmafnpdpkkptggnimahssttrlgfkkgkgcqrlckvvdspclpeaecv
faiyedgvgdp

Sequence, based on observed residues (ATOM records):

>d1szpf2 c.37.1.11 (F:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
vtaadfhmrrseliclttgsknldtllgggvetgsitelfgefrtgksqlchtlavtcqi
pldigggegkclyidtegtfrpvrlvsiaqrfgldpddalnnvayaraynadhqlrllda
aaqmmsesrfslivvdsvmalyrtdelsarqmhlakfmralqrladqfgvavvvtnqvtg
gnimahssttrlgfkkgkgcqrlckvvdspclpeaecvfaiyedgvgdp

Timeline for d1szpf2:

• d1szpf2 first appeared in SCOP 1.69
  
• d1szpf2 appears in SCOPe 2.05
  
• d1szpf2 appears in SCOPe 2.07
  
• d1szpf2 appears in the current release, SCOPe 2.08