SCOPe 2.08: Domain d1sska1: 1ssk A:5-158

Lineage for d1sska1 (1ssk A:5-158)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.148: Coronavirus RNA-binding domain [110303] (1 superfamily)
   coiled antiparallel beta-sheet of 5 strands, order 51324; complex topology, crossing loops

4. Superfamily b.148.1: Coronavirus RNA-binding domain [110304] (1 family)
   automatically mapped to Pfam PF00937

5. Family b.148.1.1: Coronavirus RNA-binding domain [110305] (1 protein)
   N-terminal part of Pfam PF00937

6. Protein Nucleocapsid protein [110306] (2 species)

7. Species SARS coronavirus, (SARS-CoV) [TaxId:227859] [110307] (1 PDB entry)
   Uniprot P59595 45-181

8. Domain d1sska1: 1ssk A:5-158 [105986]
   Other proteins in same PDB: d1sska2

Details for d1sska1

PDB Entry: 1ssk

PDB Description: structure of the n-terminal rna-binding domain of the sars cov nucleocapsid protein

PDB Compounds: (A:) nucleocapsid protein

SCOPe Domain Sequences for d1sska1:

Sequence; same for both SEQRES and ATOM records:

>d1sska1 b.148.1.1 (A:5-158) Nucleocapsid protein {SARS coronavirus, (SARS-CoV) [TaxId: 227859]}
hhhhhhssglvprgsamglpnntaswftaltqhgkeelrfprgqgvpintnsgpddqigy
yrratrrvrggdgkmkelsprwyfyylgtgpeaslpygankegivwvategalntpkdhi
gtrnpnnnaatvlqlpqgttlpkgfyaegsrggs

Timeline for d1sska1:

• d1sska1 first appeared in SCOP 1.69, called d1sska_
  
• d1sska1 appears in SCOPe 2.07