SCOPe 2.06: Domain d1sq9a_: 1sq9 A:

Lineage for d1sq9a_ (1sq9 A:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.69: 7-bladed beta-propeller [50964] (15 superfamilies)
   consists of seven 4-stranded beta-sheet motifs; meander

4. Superfamily b.69.4: WD40 repeat-like [50978] (4 families)
   also contains 8-bladed propellers

5. Family b.69.4.1: WD40-repeat [50979] (13 proteins)
   this is a repeat family; one repeat unit is 1tyq C:201-243 found in domain

6. Protein Antiviral protein Ski8 (Ski8p) [110287] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110288] (2 PDB entries)
   Uniprot Q02793

8. Domain d1sq9a_: 1sq9 A: [105889]
   complexed with so4

Details for d1sq9a_

PDB Entry: 1sq9, 1.9 Å

PDB Description: structure of ski8p, a wd repeat protein involved in mrna degradation and meiotic recombination

PDB Compounds: (A:) Antiviral protein SKI8

SCOPe Domain Sequences for d1sq9a_:

Sequence, based on SEQRES records:

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
kvfiatanagkahdadifsvsacnsftvscsgdgylkvwdnklldnenpkdksyshfvhk
sglhhvdvlqaierdafelclvattsfsgdllfyritredetkkvifekldlldsdmkkh
sfwalkwgasndrllshrlvatdvkgttyiwkfhpfadesnsltlnwsptlelqgtvesp
mtpsqfatsvdisergliatgfnngtvqiselstlrplynfesqhsminnsnsirsvkfs
pqgsllaiahdsnsfgcitlyetefgerigslsvpthssqaslgefahsswvmslsfnds
getlcsagwdgklrfwdvktkerittlnmhcddieieedilavdehgdslaepgvfdvkf
lkkgwrsgmgadlneslccvcldrsirwfreag

Sequence, based on observed residues (ATOM records):

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
kvfiatanagkahdadifsvsacnsftvscsgdgylkvwdnklldnenpkdksyshfvhk
sglhhvdvlqaierdafelclvattsfsgdllfyritredetkkvifekldlldsdmkkh
sfwalkwgasnshrlvatdvkgttyiwkfhpfadesnsltlnwsptlelqgtvespmtps
qfatsvdisergliatgfnngtvqiselstlrplynfesqhnnsnsirsvkfspqgslla
iahdsnsfgcitlyetefgerigslsvpgefahsswvmslsfndsgetlcsagwdgklrf
wdvktkerittlnmhcddieieedilavdehgdslaepgvfdvkflkkgwrsgmgadlne
slccvcldrsirwfreag

Timeline for d1sq9a_:

• d1sq9a_ first appeared in SCOP 1.69
  
• d1sq9a_ appears in SCOPe 2.05
  
• d1sq9a_ appears in SCOPe 2.07
  
• d1sq9a_ appears in the current release, SCOPe 2.08