SCOP 1.75: Domain d1skma_: 1skm A:

Lineage for d1skma_ (1skm A:)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (57 families)

5. Family c.66.1.26: C5 cytosine-specific DNA methylase, DCM [88786] (3 proteins)

6. Protein DNA methylase HhaI [53367] (1 species)

7. Species Haemophilus haemolyticus [TaxId:726] [53368] (20 PDB entries)
   Uniprot P05102

8. Domain d1skma_: 1skm A: [105675]
   complexed with hcx, sah

Details for d1skma_

PDB Entry: 1skm, 2.2 Å

PDB Description: HhaI methyltransferase in complex with DNA containing an abasic south carbocyclic sugar at its target site

PDB Compounds: (A:) modification methylase hhai

SCOP Domain Sequences for d1skma_:

Sequence; same for both SEQRES and ATOM records:

>d1skma_ c.66.1.26 (A:) DNA methylase HhaI {Haemophilus haemolyticus [TaxId: 726]}
mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegd
itqvnektipdhdilcagfpcqafsisgkqkgfedsrgtlffdiarivrekkpkvvfmen
vknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnf
qfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggqger
iystrgiaitlsaygggifaktggylvngktrklhprecarvmgypdsykvhpstsqayk
qfgnsvvinvlqyiaynigsslnfkpy

Timeline for d1skma_:

• d1skma_ first appeared in SCOP 1.69
  
• d1skma_ appears in SCOP 1.73
  
• d1skma_ appears in SCOPe 2.01
  
• d1skma_ appears in the current release, SCOPe 2.08