Lineage for d1sjea1 (1sje A:82-181)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2021990Protein Class II MHC alpha chain, C-terminal domain [88618] (6 species)
  7. 2021998Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88621] (37 PDB entries)
    Uniprot P01903 28-207
    probably orthologous to the mouse I-E group
  8. 2022010Domain d1sjea1: 1sje A:82-181 [105640]
    Other proteins in same PDB: d1sjea2, d1sjeb1, d1sjeb2, d1sjed1, d1sjed2

Details for d1sjea1

PDB Entry: 1sje (more details), 2.45 Å

PDB Description: HLA-DR1 complexed with a 16 residue HIV capsid peptide bound in a hairpin conformation
PDB Compounds: (A:) hla class II histocompatibility antigen, dr alpha chain

SCOPe Domain Sequences for d1sjea1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1sjea1 b.1.1.2 (A:82-181) Class II MHC alpha chain, C-terminal domain {Human (Homo sapiens), HLA-DR group [TaxId: 9606]}
itnvppevtvltnspvelrepnvlicfidkftppvvnvtwlrngkpvttgvsetvflpre
dhlfrkfhylpflpstedvydcrvehwgldepllkhwefd

SCOPe Domain Coordinates for d1sjea1:

Click to download the PDB-style file with coordinates for d1sjea1.
(The format of our PDB-style files is described here.)

Timeline for d1sjea1: