SCOPe 2.07: Domain d1sddb4: 1sdd B:2025-2182

Lineage for d1sddb4 (1sdd B:2025-2182)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll

4. Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families)

5. Family b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) [49791] (4 proteins)
   automatically mapped to Pfam PF00754

6. Protein C2 domain of factor V [49792] (2 species)

7. Species Cow (Bos taurus) [TaxId:9913] [110117] (1 PDB entry)
   Uniprot Q28107 29-324,1566-2210

8. Domain d1sddb4: 1sdd B:2025-2182 [105436]
   Other proteins in same PDB: d1sdda1, d1sdda2, d1sddb1, d1sddb2
   complexed with ca, cu, nag, ndg

Details for d1sddb4

PDB Entry: 1sdd, 2.8 Å

PDB Description: crystal structure of bovine factor vai

PDB Compounds: (B:) Coagulation factor V

SCOPe Domain Sequences for d1sddb4:

Sequence; same for both SEQRES and ATOM records:

>d1sddb4 b.18.1.2 (B:2025-2182) C2 domain of factor V {Cow (Bos taurus) [TaxId: 9913]}
cstplgmesgkienkqitassfkkswwgnywepflarlnaqgrvnawqakannnnqwlqi
dllkikkitaivtqgckslssemyvksytihysdqgtdwkpyrekssmvdkifegnnnvr
ghvknffnppiisrfiriipktwnqsialrlelfgcdm

Timeline for d1sddb4:

• d1sddb4 first appeared in SCOP 1.69
  
• d1sddb4 appears in SCOPe 2.06
  
• d1sddb4 appears in the current release, SCOPe 2.08