SCOPe 2.08: Domain d1sdda1: 1sdd A:1-180

Lineage for d1sdda1 (1sdd A:1-180)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
   sandwich; 7 strands in 2 sheets, greek-key
   variations: some members have additional 1-2 strands

4. Superfamily b.6.1: Cupredoxins [49503] (8 families)
   contains copper-binding site

5. Family b.6.1.3: Multidomain cupredoxins [49550] (15 proteins)

6. Protein Coagulation factor V [110103] (1 species)

7. Species Cow (Bos taurus) [TaxId:9913] [110104] (1 PDB entry)
   Uniprot Q28107 29-324, 1566-2210

8. Domain d1sdda1: 1sdd A:1-180 [105431]
   Other proteins in same PDB: d1sddb3, d1sddb4
   complexed with ca, cu, nag
   has additional insertions and/or extensions that are not grouped together

Details for d1sdda1

PDB Entry: 1sdd, 2.8 Å

PDB Description: crystal structure of bovine factor vai

PDB Compounds: (A:) Coagulation factor V

SCOPe Domain Sequences for d1sdda1:

Sequence, based on SEQRES records:

>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]}
aklrqfyvaaqsirwnyrpesthlsskpfetsfkkivyreyeayfqkekpqsrtsgllgp
tlyaevgdimkvhfknkahkplsihaqgikyskfsegasysdhtlpmekmddavapgqey
tyewiisehsgpthddppclthiyysyvnlvedfnsgligpllickkgtltedgtqkmfe

Sequence, based on observed residues (ATOM records):

>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]}
aklrqfyvaaqsirwntsfkkivyreyeayfqkekpqsrtsgllgptlyaevgdimkvhf
knkahkplsihaqgikyskfsegasysdhtlpmekmddavapgqeytyewiisehsgpth
ddppclthiyysyvnlvedfnsgligpllickkgtltedgtqkmfe

Timeline for d1sdda1:

• d1sdda1 first appeared in SCOP 1.69
  
• d1sdda1 appears in SCOPe 2.07