SCOP 1.69: Domain d1sb7b_: 1sb7 B:

Lineage for d1sb7b_ (1sb7 B:)

1. Root: SCOP 1.69

2. Class d: Alpha and beta proteins (a+b) [53931] (279 folds)

3. Fold d.265: Pseudouridine synthase [100877] (1 superfamily)
   consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold

4. Superfamily d.265.1: Pseudouridine synthase [55120] (4 families)
   the active site is the most conserved structural region of the superfamily and is located between the subdomains

5. Family d.265.1.4: tRNA pseudouridine synthase TruD [103021] (1 protein)
   natural circular permutation in the catalytic domain; insertion of the family-specific alpha+beta subdomain

6. Protein tRNA pseudouridine synthase TruD [103022] (1 species)

7. Species Escherichia coli [TaxId:562] [103023] (3 PDB entries)
   family-specific insert subdomain: res. 158-301

8. Domain d1sb7b_: 1sb7 B: [105409]

Details for d1sb7b_

PDB Entry: 1sb7, 2.2 Å

PDB Description: Crystal structure of the E.coli pseudouridine synthase TruD

SCOP Domain Sequences for d1sb7b_:

Sequence, based on SEQRES records:

>d1sb7b_ d.265.1.4 (B:) tRNA pseudouridine synthase TruD {Escherichia coli}
prgshmiefdnltylhgkpqgtgllkanpedfvvvedlgfepdgegehilvrilkngcnt
rfvadalakflkiharevsfagqkdkhavteqwlcarvpgkempdlsafqlegcqvleya
rhkrklrlgalkgnaftlvlrevsnrddveqrlidicvkgvpnyfgaqrfgiggsnlqga
qrwaqtntpvrdrnkrsfwlsaarsalfnqivaerlkkadvnqvvdgdalqlagrgswfv
atteelaelqrrvndkelmitaalpgsgewgtqrealafeqaavaaetelqallvrekve
aarramllypqqlswnwwddvtveirfwlpagsfatsvvrelint

Sequence, based on observed residues (ATOM records):

>d1sb7b_ d.265.1.4 (B:) tRNA pseudouridine synthase TruD {Escherichia coli}
prgsmiefdnltylhgkpqgtgllkanpedfvvvedlgfepdgegehilvrilkngcntr
fvadalakflkiharevsfagqkdkhavteqwlcarvpgkempdlsafqlegcqvleyar
hkrklrlgalkgnaftlvlrevsnrddveqrlidicvkgvpnyfgaqrfgiggsnlqgaq
rwaqtntpvrdrnkrsfwlsaarsalfnqivaerlkkadvnqvvdgdalqlagrgswfva
tteelaelqrrvndkelmitaalpgsgewgtqrealafeqaavaaetelqallvrekvea
arramllypqqlswnwwddvtveirfwlpagsfatsvvrelint

Timeline for d1sb7b_:

• d1sb7b_ is new in SCOP 1.69
  
• d1sb7b_ appears in SCOP 1.71
  
• d1sb7b_ appears in the current release, SCOPe 2.08, called d1sb7b1