Lineage for d1sb7a1 (1sb7 A:1-341)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3009172Fold d.265: Pseudouridine synthase [100877] (1 superfamily)
    consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold
  4. 3009173Superfamily d.265.1: Pseudouridine synthase [55120] (5 families) (S)
    the active site is the most conserved structural region of the superfamily and is located between the subdomains
  5. 3009235Family d.265.1.4: tRNA pseudouridine synthase TruD [103021] (1 protein)
    natural circular permutation in the catalytic domain; insertion of the family-specific alpha+beta subdomain
    automatically mapped to Pfam PF01142
  6. 3009236Protein tRNA pseudouridine synthase TruD [103022] (1 species)
  7. 3009237Species Escherichia coli [TaxId:562] [103023] (3 PDB entries)
    Uniprot Q57261
    family-specific insert subdomain: res. 158-301
  8. 3009238Domain d1sb7a1: 1sb7 A:1-341 [105408]
    Other proteins in same PDB: d1sb7a2, d1sb7b2
    complexed with gol, po4

Details for d1sb7a1

PDB Entry: 1sb7 (more details), 2.2 Å

PDB Description: Crystal structure of the E.coli pseudouridine synthase TruD
PDB Compounds: (A:) tRNA pseudouridine synthase D

SCOPe Domain Sequences for d1sb7a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1sb7a1 d.265.1.4 (A:1-341) tRNA pseudouridine synthase TruD {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d1sb7a1:

Click to download the PDB-style file with coordinates for d1sb7a1.
(The format of our PDB-style files is described here.)

Timeline for d1sb7a1:

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