Class b: All beta proteins [48724] (180 folds) |
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies |
Superfamily b.121.5: ssDNA viruses [88645] (4 families) |
Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins) automatically mapped to Pfam PF00740 |
Protein Parvovirus (panleukopenia virus) capsid protein [49661] (6 species) |
Species Human parvovirus B19 [TaxId:10798] [110116] (1 PDB entry) Uniprot Q9JGS0 246-781 |
Domain d1s58a_: 1s58 A: [105262] |
PDB Entry: 1s58 (more details), 3.5 Å
SCOPe Domain Sequences for d1s58a_:
Sequence, based on SEQRES records: (download)
>d1s58a_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Human parvovirus B19 [TaxId: 10798]} npvksmwsegatfsansvtctfsrqflipydpehhykvfspaasschnasgkeakvctit pimgystpwryldfnalnlffsplefqhlienygsiapdaltvtiseiavkdvtdktggg vqvtdsatgrlcmlvdheykypyvlgqgqdtlapelpiwvyfppqyayltvgdvntqgis gdskklaseesafyvlehssfqllgtggtatmsykfppvppenlegcsqhfyemynplyg srlgvpdtlggdpkfrslthedhaiqpqnfmpgplvnsvstkegdssntgagkaltglst gtsqntrislrpgpvsqpyhhwdtdkyvtginaishgqttygnaedkeyqqgvgrfpnek eqlkqlqglnmhtyfpnkgtqqytdqierplmvgsvwnrralhyesqlwskipnlddsfk tqfaalggwglhqpppqiflkilpqsgpiggiksmgittlvqyavgimtvtmtfklgprk atgrwnpqpgvypphaaghlpyvlydptatdakqhhrhgyekpeelwtaksrvhpl
>d1s58a_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Human parvovirus B19 [TaxId: 10798]} npvksmwsegatfsansvtctfsrqflipydpehhykvfspaasschnasgkeakvctit pimgystpwryldfnalnlffsplefqhlienygsiapdaltvtiseiavkdvtdktggg vqvtdsatgrlcmlvdheykypyvlgqgqdtlapelpiwvyfppqyayltvgdvntqgis gdskklaseesafyvlehssfqllgtggtatmsykfppvppenlegcsqhfyemynplyg srlgvpdtlggdpkfrslthedhaiqpqnfmpgplvnsvstktglstgtsqntrislrpg pvsqpyhhwdtdkyvtginaishgqttygnaedkeyqqgvgrfpnekeqlkqlqglnmht yfpnkgtqqytdqierplmvgsvwnrralhyesqlwskipnlddsfktqfaalggwglhq pppqiflkilpqsgpiggiksmgittlvqyavgimtvtmtfklgprkatgrwnpqpgvyp phaaghlpyvlydptatdakqhhrhgyekpeelwtaksrvhpl
Timeline for d1s58a_: