Lineage for d1s1za_ (1s1z A:)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families) (S)
    alpha-beta(2)-alpha(2)-beta(3)
  5. Family d.110.3.1: PYP-like [55786] (3 proteins)
  6. Protein Photoactive yellow protein, PYP [55787] (1 species)
  7. Species Methylophilus methylotrophus, strain w3a1 [TaxId:17] [55788] (82 PDB entries)
    Uniprot P16113
  8. Domain d1s1za_: 1s1z A: [105221]
    complexed with hc4; mutant

Details for d1s1za_

PDB Entry: 1s1z (more details), 1.6 Å

PDB Description: photoactivated chromophore conformation in photoactive yellow protein (e46q mutant) from 10 to 500 nanoseconds
PDB Compounds: (A:) Photoactive yellow protein

SCOPe Domain Sequences for d1s1za_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1s1za_ d.110.3.1 (A:) Photoactive yellow protein, PYP {Methylophilus methylotrophus, strain w3a1 [TaxId: 17]}
mehvafgsedientlakmddgqldglafgaiqldgdgnilqynaaqgditgrdpkqvigk
nffkdvapctdspefygkfkegvasgnlntmfeytfdyqmtptkvkvhmkkalsgdsywv
fvkrv

SCOPe Domain Coordinates for d1s1za_ are not available.

Timeline for d1s1za_: