Lineage for d1s0ka1 (1s0k A:409-632)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 555832Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 555833Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (21 families) (S)
  5. 556713Family b.29.1.15: Trypanosoma sialidase, C-terminal domain [82038] (1 protein)
  6. 556714Protein Trypanosoma sialidase, C-terminal domain [82039] (2 species)
  7. 556715Species Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId:5693] [89271] (11 PDB entries)
  8. 556719Domain d1s0ka1: 1s0k A:409-632 [105150]
    Other proteins in same PDB: d1s0ka2
    complexed with fsi, gol; mutant

Details for d1s0ka1

PDB Entry: 1s0k (more details), 1.6 Å

PDB Description: Trypanosoma cruzi trans-sialidase in complex with 2,3-difluorosialic acid (covalent intermediate)

SCOP Domain Sequences for d1s0ka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1s0ka1 b.29.1.15 (A:409-632) Trypanosoma sialidase, C-terminal domain {Parasitic flagellate protozoan (Trypanosoma cruzi)}
gcgpavttvglvgflshsatktewedayrcvnastanaervpnglkfagvgggalwpvsq
qgqnqryhfanhaftlvasvtihevpkgaspllgasldssggkkllglsydkrhqwqpiy
gstpvtptgswemgkryhvvltmankigsvyidgeplegsgqtvvpdertpdishfyvgg
ykrsgmptdsrvtvnnvllynrqlnaeeirtlflsqdligteah

SCOP Domain Coordinates for d1s0ka1:

Click to download the PDB-style file with coordinates for d1s0ka1.
(The format of our PDB-style files is described here.)

Timeline for d1s0ka1:

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Domains from same chain:
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d1s0ka2