SCOPe 2.08: Domain d1rvya_: 1rvy A:

Lineage for d1rvya_ (1rvy A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
   formerly omega-Aminoacid:pyruvate aminotransferase-like

6. Protein Serine hydroxymethyltransferase [53429] (7 species)

7. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53430] (6 PDB entries)
   Uniprot P07511

8. Domain d1rvya_: 1rvy A: [105108]
   complexed with plg, plp, po4; mutant

Details for d1rvya_

PDB Entry: 1rvy, 2.9 Å

PDB Description: e75q mutant of rabbit cytosolic serine hydroxymethyltransferase, complex with glycine

PDB Compounds: (A:) Serine hydroxymethyltransferase, cytosolic

SCOPe Domain Sequences for d1rvya_:

Sequence, based on SEQRES records:

>d1rvya_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
wssheqmlaqplkdsdaevydiikkesnrqrvgleliasenfasravlealgsclnnkys
qgypgqryyggtehideletlcqkralqaygldpqcwgvnvqpysgspanfavytalvep
hgrimgldlpdgghlthgfmtdkkkisatsiffesmaykvnpdtgyidydrleenarlfh
pkliiagtscysrnldygrlrkiadengaylmadmahisglvvagvvpspfehchvvttt
thktlrgcragmifyrrgvrsvdpktgkeilynleslinsavfpglqggphnhaiagvav
alkqamtpefkeyqrqvvancralsaalvelgykivtggsdnhlilvdlrskgtdggrae
kvleacsiacnkntcpgdksalrpsglrlgtpaltsrgllekdfqkvahfihrgieltvq
iqddtgpratlkefkeklagdekhqravralrqevesfaalfplpglpgf

Sequence, based on observed residues (ATOM records):

>d1rvya_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
wssheqmlaqplkdsdaevydiikkesnrqrvgleliasenfasravlealgsclnnkys
qgypgqryyggtehideletlcqkralqaygldpqcwgvnvqpysgspanfavytalvep
hgrimgldlpdgghlthgfmtdkkkisatsiffesmaykvnpdtgyidydrleenarlfh
pkliiagtscysrnldygrlrkiadengaylmadmahisglvvagvvpspfehchvvttt
thktlrgcragmifyrrgvrseilynleslinsavfpglqggphnhaiagvavalkqamt
pefkeyqrqvvancralsaalvelgykivtggsdnhlilvdlrskgtdggraekvleacs
iacnkntcpgdksalrpsglrlgtpaltsrgllekdfqkvahfihrgieltvqiqddtgp
ratlkefkeklagdekhqravralrqevesfaalfplpglpgf

Timeline for d1rvya_:

• d1rvya_ first appeared in SCOP 1.69
  
• d1rvya_ appears in SCOPe 2.07