Lineage for d1rrvb_ (1rrv B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2142044Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
    consists of two non-similar domains with 3 layers (a/b/a) each
    domain 1: parallel beta-sheet of 7 strands, order 3214567
    domain 2: parallel beta-sheet of 6 strands, order 321456
  4. 2142045Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families) (S)
  5. 2142395Family c.87.1.5: Gtf glycosyltransferase [64178] (3 protein domains)
    Glycosyltransferase family 28
  6. 2142404Protein TDP-vancosaminyltransferase GftD [110732] (1 species)
  7. 2142405Species Amycolatopsis orientalis [TaxId:31958] [110733] (1 PDB entry)
    Uniprot Q9AFC7
  8. 2142407Domain d1rrvb_: 1rrv B: [105084]
    complexed with bgc, gol, k, tyd

Details for d1rrvb_

PDB Entry: 1rrv (more details), 2 Å

PDB Description: X-ray crystal structure of TDP-vancosaminyltransferase GtfD as a complex with TDP and the natural substrate, desvancosaminyl vancomycin.
PDB Compounds: (B:) glycosyltransferase gtfd

SCOPe Domain Sequences for d1rrvb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rrvb_ c.87.1.5 (B:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

SCOPe Domain Coordinates for d1rrvb_:

Click to download the PDB-style file with coordinates for d1rrvb_.
(The format of our PDB-style files is described here.)

Timeline for d1rrvb_: