Lineage for d1rm5o1 (1rm5 O:1-148,O:313-333)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 685975Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 685976Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (12 families) (S)
  5. 687227Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
    family members also share a common alpha+beta fold in C-terminal domain
  6. 687423Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (18 species)
  7. 687567Species Spinach (Spinacia oleracea) [TaxId:3562] [69409] (8 PDB entries)
  8. 687573Domain d1rm5o1: 1rm5 O:1-148,O:313-333 [105010]
    Other proteins in same PDB: d1rm5a2, d1rm5b2, d1rm5o2
    complexed with ndp, so4; mutant

Details for d1rm5o1

PDB Entry: 1rm5 (more details), 2.1 Å

PDB Description: crystal structure of mutant s188a of photosynthetic glyceraldehyde-3- phosphate dehydrogenase a4 isoform, complexed with nadp
PDB Compounds: (O:) Glyceraldehyde 3-phosphate dehydrogenase A

SCOP Domain Sequences for d1rm5o1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rm5o1 c.2.1.3 (O:1-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

SCOP Domain Coordinates for d1rm5o1:

Click to download the PDB-style file with coordinates for d1rm5o1.
(The format of our PDB-style files is described here.)

Timeline for d1rm5o1: