SCOPe 2.08: Domain d1r9db_: 1r9d B:

Lineage for d1r9db_ (1r9d B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.7: PFL-like glycyl radical enzymes [51997] (1 superfamily)
   contains: barrel, closed; n=10, S=10; accommodates a hairpin loop inside the barrel

4. Superfamily c.7.1: PFL-like glycyl radical enzymes [51998] (6 families)
   duplication: the N- and C-terminal halves have similar topologies

5. Family c.7.1.1: PFL-like [51999] (2 proteins)
   Pfam PF02901; except the C-terminal ~100 residues covered by Pfam PF01228

6. Protein Glycerol dehydratase DhaB1 [110445] (1 species)

7. Species Clostridium butyricum [TaxId:1492] [110446] (4 PDB entries)
   Uniprot Q8GEZ8

8. Domain d1r9db_: 1r9d B: [104866]
   complexed with gol

Details for d1r9db_

PDB Entry: 1r9d, 1.8 Å

PDB Description: Glycerol bound form of the B12-independent glycerol dehydratase from Clostridium butyricum

PDB Compounds: (B:) glycerol dehydratase

SCOPe Domain Sequences for d1r9db_:

Sequence; same for both SEQRES and ATOM records:

>d1r9db_ c.7.1.1 (B:) Glycerol dehydratase DhaB1 {Clostridium butyricum [TaxId: 1492]}
iskgfstqterinilkaqilnakpcveserailitesfkqtegqpailrralalkhilen
ipitirdqelivgsltkeprssqvfpefsnkwlqdeldrlnkrtgdafqiseeskeklkd
vfeywngkttselatsymteetreavncdvftvgnyyyngvghvsvdygkvlrvgfngii
neakeqleknrsidpdfikkekflnsviisceaaityvnryakkakeiadntsdakrkae
lneiakicskvsgegaksfyeacqlfwfihaiiniesnghsisparfdqymypyyendkn
itdkfaqelidciwiklndinkvrdeistkhfggypmyqnlivggqnsegkdatnkvsym
aleaavhvklpqpslsvriwnktpdefllraaeltreglglpayyndeviipalvsrglt
ledardygiigcvepqkpgktegwhdsaffnlariveltinsgfdknkqigpktqnfeem
ksfdefmkaykaqmeyfvkhmccadncidiahaeraplpflssmvdncigkgkslqdgga
eynfsgpqgvgvanigdslvavkkivfdenkitpselkktlnndfknseeiqallknapk
fgndidevdnlaregalvycrevnkytnprggnfqpglypssinvyfgsltgatpdgrks
gqpladgvspsrgcdvsgptaacnsvskldhfiasngtlfnqkfhpsalkgdnglmnlss
lirsyfdqkgfhvqfnvidkkillaaqknpekyqdlivrvagysaqfisldksiqndiia
rtehvm

Timeline for d1r9db_:

• d1r9db_ first appeared in SCOP 1.69
  
• d1r9db_ appears in SCOPe 2.07