Lineage for d1r8ja2 (1r8j A:2-135)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2101600Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. 2101601Superfamily c.23.1: CheY-like [52172] (8 families) (S)
  5. 2101955Family c.23.1.5: N-terminal domain of the circadian clock protein KaiA [82344] (1 protein)
    lacks canonical receiver domains features
  6. 2101956Protein N-terminal domain of the circadian clock protein KaiA [82345] (1 species)
  7. 2101957Species Synechococcus elongatus [TaxId:32046] [82346] (3 PDB entries)
    Uniprot Q79PF6
  8. 2101958Domain d1r8ja2: 1r8j A:2-135 [104848]
    Other proteins in same PDB: d1r8ja1, d1r8ja3, d1r8jb1, d1r8jb3
    structured linker 136-176 in swapped dimer

Details for d1r8ja2

PDB Entry: 1r8j (more details), 2.03 Å

PDB Description: Crystal Structure of Circadian Clock Protein KaiA from Synechococcus elongatus
PDB Compounds: (A:) KaiA

SCOPe Domain Sequences for d1r8ja2:

Sequence, based on SEQRES records: (download)

>d1r8ja2 c.23.1.5 (A:2-135) N-terminal domain of the circadian clock protein KaiA {Synechococcus elongatus [TaxId: 32046]}
lsqiaiciwvestailqdcqralsadryqlqvcesgemlleyaqthrdqidclilvaanp
sfravvqqlcfegvvvpaivvgdrdsedpdepakeqlyhsaelhlgihqleqlpyqvdaa
laeflrlapvetma

Sequence, based on observed residues (ATOM records): (download)

>d1r8ja2 c.23.1.5 (A:2-135) N-terminal domain of the circadian clock protein KaiA {Synechococcus elongatus [TaxId: 32046]}
lsqiaiciwvestailqdcqralsadryqlqvcesgemlleyaqthrdqidclilvaanp
sfravvqqlcfegvvvpaivvgdrdpakeqlyhsaelhlgihqleqlpyqvdaalaeflr
lapvetma

SCOPe Domain Coordinates for d1r8ja2:

Click to download the PDB-style file with coordinates for d1r8ja2.
(The format of our PDB-style files is described here.)

Timeline for d1r8ja2: