Lineage for d1qvod2 (1qvo D:1-181)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2506503Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 2506504Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 2506505Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)
  6. 2506604Protein Class I MHC, alpha-1 and alpha-2 domains [54468] (28 species)
  7. 2506609Species Human (Homo sapiens), HLA-A11 [TaxId:9606] [110840] (4 PDB entries)
    Uniprot P13746 25-299 # 1A11_HUMAN HLA class I histocompatibility antigen, A-11 alpha chain precursor
  8. 2506615Domain d1qvod2: 1qvo D:1-181 [104600]
    Other proteins in same PDB: d1qvoa1, d1qvob1, d1qvob2, d1qvod1, d1qvoe1, d1qvoe2

Details for d1qvod2

PDB Entry: 1qvo (more details), 2.22 Å

PDB Description: structures of hla-a*1101 in complex with immunodominant nonamer and decamer hiv-1 epitopes clearly reveal the presence of a middle anchor residue
PDB Compounds: (D:) HLA class I histocompatibility antigen, A-11 alpha chain

SCOPe Domain Sequences for d1qvod2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1qvod2 d.19.1.1 (D:1-181) Class I MHC, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-A11 [TaxId: 9606]}
gshsmryfytsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dqetrnvkaqsqtdrvdlgtlrgyynqsedgshtiqimygcdvgpdgrflrgyrqdaydg
kdyialnedlrswtaadmaaqitkrkweaahaaeqqraylegrcvewlrrylengketlq
r

SCOPe Domain Coordinates for d1qvod2:

Click to download the PDB-style file with coordinates for d1qvod2.
(The format of our PDB-style files is described here.)

Timeline for d1qvod2: