Lineage for d1q94e1 (1q94 E:1-99)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2348364Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2348365Protein beta2-microglobulin [88600] (6 species)
  7. 2348380Species Human (Homo sapiens) [TaxId:9606] [88602] (425 PDB entries)
    Uniprot P61769 21-119 ! Uniprot P01884
  8. 2348745Domain d1q94e1: 1q94 E:1-99 [104564]
    Other proteins in same PDB: d1q94a1, d1q94a2, d1q94b2, d1q94d1, d1q94d2, d1q94e2

Details for d1q94e1

PDB Entry: 1q94 (more details), 2.4 Å

PDB Description: structures of hla-a*1101 in complex with immunodominant nonamer and decamer hiv-1 epitopes clearly reveal the presence of a middle anchor residue
PDB Compounds: (E:) Beta-2-microglobulin

SCOPe Domain Sequences for d1q94e1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q94e1 b.1.1.2 (E:1-99) beta2-microglobulin {Human (Homo sapiens) [TaxId: 9606]}
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

SCOPe Domain Coordinates for d1q94e1:

Click to download the PDB-style file with coordinates for d1q94e1.
(The format of our PDB-style files is described here.)

Timeline for d1q94e1: