Lineage for d1q94a2 (1q94 A:1-181)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)
  6. Protein Class I MHC, alpha-1 and alpha-2 domains [54468] (29 species)
  7. Species Human (Homo sapiens), HLA-A11 [TaxId:9606] [110840] (4 PDB entries)
    Uniprot P13746 25-299 # 1A11_HUMAN HLA class I histocompatibility antigen, A-11 alpha chain precursor
  8. Domain d1q94a2: 1q94 A:1-181 [104560]
    Other proteins in same PDB: d1q94a1, d1q94b1, d1q94b2, d1q94d1, d1q94e1, d1q94e2

Details for d1q94a2

PDB Entry: 1q94 (more details), 2.4 Å

PDB Description: structures of hla-a*1101 in complex with immunodominant nonamer and decamer hiv-1 epitopes clearly reveal the presence of a middle anchor residue
PDB Compounds: (A:) HLA class I histocompatibility antigen, A-11 alpha chain

SCOPe Domain Sequences for d1q94a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q94a2 d.19.1.1 (A:1-181) Class I MHC, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-A11 [TaxId: 9606]}
gshsmryfytsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dqetrnvkaqsqtdrvdlgtlrgyynqsedgshtiqimygcdvgpdgrflrgyrqdaydg
kdyialnedlrswtaadmaaqitkrkweaahaaeqqraylegrcvewlrrylengketlq
r

SCOPe Domain Coordinates for d1q94a2 are not available.

Timeline for d1q94a2:

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Domains from same chain:
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d1q94a1
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Domains from other chains:
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d1q94b1, d1q94b2, d1q94d1, d1q94d2, d1q94e1, d1q94e2