SCOPe 2.08: Domain d1pb0a_: 1pb0 A:

Lineage for d1pb0a_ (1pb0 A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
   variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands

4. Superfamily c.6.3: PHP domain-like [89550] (3 families)

5. Family c.6.3.1: PHP domain [89551] (2 proteins)
   putative phosphoesterase domain; contains trinuclear metal-binding site; some similarity to the metallohydrolases of TIM-barrel fold

6. Protein Hypothetical protein YcdX [89552] (1 species)

7. Species Escherichia coli [TaxId:562] [89553] (3 PDB entries)
   Uniprot P75914

8. Domain d1pb0a_: 1pb0 A: [104099]
   Structural genomics target
   complexed with fmt, so4, zn

Details for d1pb0a_

PDB Entry: 1pb0, 1.95 Å

PDB Description: ycdx protein in autoinhibited state

PDB Compounds: (A:) Hypothetical protein ycdX

SCOPe Domain Sequences for d1pb0a_:

Sequence, based on SEQRES records:

>d1pb0a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]}
mypvdlhmhtvasthaystlsdyiaqakqkgiklfaitdhgpdmedaphhwhfinmriwp
rvvdgvgilrgieaniknvdgeidcsgkmfdsldliiagfhepvfaphdkatntqamiat
iasgnvhiishpgnpkyeidvkavaeaaakhqvaleinnssflhsrkgsedncrevaaav
rdaggwvalgsdshtaftmgefeeclkildavdfpperilnvsprrllnflesrgmapia
efadl

Sequence, based on observed residues (ATOM records):

>d1pb0a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]}
mypvdlhmhtvasthaystlsdyiaqakqkgiklfaitdhgpdmedaphhwhfinmriwp
rvvdgvgilrgieaniknvdgeidcsgkmfdsldliiagfhepvfaphdkatntqamiat
iasgnvhiishpgnpkyeidvkavaeaaakhqvaleinflhsncrevaaavrdaggwval
gsdshtaftmgefeeclkildavdfpperilnvsprrllnflesrgmapiaefadl

Timeline for d1pb0a_:

• d1pb0a_ first appeared in SCOP 1.69
  
• d1pb0a_ appears in SCOPe 2.07