SCOPe 2.08: Domain d1omoa_: 1omo A:

Lineage for d1omoa_ (1omo A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.13: Ornithine cyclodeaminase-like [110436] (2 proteins)
   Pfam PF02423; contains additional alpha+beta dimerisation subdomain mostly formed by the N-terminal meander beta-sheet

6. Protein Archaeal alanine dehydrogenase [110437] (1 species)

7. Species Archaeoglobus fulgidus [TaxId:2234] [110438] (2 PDB entries)
   Uniprot O28608 # Rossmann-fold core (101-292) begins with an N-terminal helix and ends with a beta-strand

8. Domain d1omoa_: 1omo A: [104017]
   complexed with na, nad

Details for d1omoa_

PDB Entry: 1omo, 2.32 Å

PDB Description: alanine dehydrogenase dimer w/bound NAD (archaeal)

PDB Compounds: (A:) alanine dehydrogenase

SCOPe Domain Sequences for d1omoa_:

Sequence; same for both SEQRES and ATOM records:

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}
metliltqeeveslismdeamnaveeafrlyalgkaqmppkvylefekgdlrampahlmg
yaglkwvnshpgnpdkglptvmalmilnspetgfplavmdatyttslrtgaaggiaakyl
arknssvfgfigcgtqayfqlealrrvfdigevkaydvrekaakkfvsycedrgisasvq
paeeasrcdvlvtttpsrkpvvkaewveegthinaigadgpgkqeldveilkkakivvdd
leqakhggeinvavskgvigvedvhatigeviaglkdgresdeeitifdstglaiqdvav
akvvyenalsknvgskikff

Timeline for d1omoa_:

• d1omoa_ first appeared in SCOP 1.69
  
• d1omoa_ appears in SCOPe 2.07