SCOPe 2.07: Domain d1nkga3: 1nkg A:1-250

Lineage for d1nkga3 (1nkg A:1-250)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.30: Supersandwich [49993] (3 superfamilies)
   sandwich; 18 strands in 2 sheets

4. Superfamily b.30.5: Galactose mutarotase-like [74650] (12 families)
   probable carbohydrate-binding domain in enzymes acting on sugars

5. Family b.30.5.10: Rhamnogalacturonase B, RhgB, N-terminal domain [110151] (2 proteins)
   automatically mapped to Pfam PF09284

6. Protein Rhamnogalacturonase B, RhgB, N-terminal domain [110152] (1 species)

7. Species Fungus (Aspergillus aculeatus) [TaxId:5053] [110153] (3 PDB entries)
   Uniprot Q00019

8. Domain d1nkga3: 1nkg A:1-250 [103861]
   Other proteins in same PDB: d1nkga1, d1nkga2
   complexed with ca, so4

Details for d1nkga3

PDB Entry: 1nkg, 1.5 Å

PDB Description: rhamnogalacturonan lyase from aspergillus aculeatus

PDB Compounds: (A:) Rhamnogalacturonase B

SCOPe Domain Sequences for d1nkga3:

Sequence; same for both SEQRES and ATOM records:

>d1nkga3 b.30.5.10 (A:1-250) Rhamnogalacturonase B, RhgB, N-terminal domain {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
afgittsssayvidtnapnqlkftvsrsscditsiihygtelqyssqgshigsglgsatv
tatqsgdyikvtcvtdtltqymvvhngdpiihmatyitaepsigelrfiarlnsdllpne
epfgdvsttadgtaiegsdvflvgsetrskfysserfiddqrhciagdahrvcmilnqye
sssggpfhrdinsnnggsynalywymnsghvqtesyrmglhgpysmyfsrsgtpstsidt
sffadldikg

Timeline for d1nkga3:

• d1nkga3 first appeared in SCOP 1.69
  
• d1nkga3 appears in SCOPe 2.06
  
• d1nkga3 appears in the current release, SCOPe 2.08