SCOP 1.73: Domain d1nkga2: 1nkg A:338-508

Lineage for d1nkga2 (1nkg A:338-508)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll

4. Superfamily b.18.1: Galactose-binding domain-like [49785] (30 families)

5. Family b.18.1.25: Rhamnogalacturonase B, RhgB, C-terminal domain [110128] (1 protein)

6. Protein Rhamnogalacturonase B, RhgB, C-terminal domain [110129] (1 species)

7. Species Aspergillus aculeatus [TaxId:5053] [110130] (1 PDB entry)

8. Domain d1nkga2: 1nkg A:338-508 [103860]
   Other proteins in same PDB: d1nkga1, d1nkga3
   complexed with ca, so4

Details for d1nkga2

PDB Entry: 1nkg, 1.5 Å

PDB Description: rhamnogalacturonan lyase from aspergillus aculeatus

PDB Compounds: (A:) Rhamnogalacturonase B

SCOP Domain Sequences for d1nkga2:

Sequence; same for both SEQRES and ATOM records:

>d1nkga2 b.18.1.25 (A:338-508) Rhamnogalacturonase B, RhgB, C-terminal domain {Aspergillus aculeatus [TaxId: 5053]}
tgttifkigewdgqptgfrnaanqlrmhpsdsrmsswgpltytvgssaltdfpmavfksv
nnpvtikftatsaqtgaatlrigttlsfaggrpqatinsytgsapaaptnldsrgvtrga
yrglgevydvsipsgtivagtntitinvisgssgdtylspnfifdcvelfq

Timeline for d1nkga2:

• d1nkga2 first appeared in SCOP 1.69
  
• d1nkga2 appears in SCOP 1.71
  
• d1nkga2 appears in SCOP 1.75
  
• d1nkga2 appears in the current release, SCOPe 2.08