Lineage for d1nkga2 (1nkg A:338-508)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2774100Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll
  4. 2774101Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families) (S)
  5. 2774875Family b.18.1.25: Rhamnogalacturonase B, RhgB, C-terminal domain [110128] (1 protein)
  6. 2774876Protein Rhamnogalacturonase B, RhgB, C-terminal domain [110129] (1 species)
  7. 2774877Species Fungus (Aspergillus aculeatus) [TaxId:5053] [110130] (3 PDB entries)
    Uniprot Q00019
  8. 2774879Domain d1nkga2: 1nkg A:338-508 [103860]
    Other proteins in same PDB: d1nkga1, d1nkga3
    complexed with ca, so4

Details for d1nkga2

PDB Entry: 1nkg (more details), 1.5 Å

PDB Description: rhamnogalacturonan lyase from aspergillus aculeatus
PDB Compounds: (A:) Rhamnogalacturonase B

SCOPe Domain Sequences for d1nkga2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1nkga2 b.18.1.25 (A:338-508) Rhamnogalacturonase B, RhgB, C-terminal domain {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
tgttifkigewdgqptgfrnaanqlrmhpsdsrmsswgpltytvgssaltdfpmavfksv
nnpvtikftatsaqtgaatlrigttlsfaggrpqatinsytgsapaaptnldsrgvtrga
yrglgevydvsipsgtivagtntitinvisgssgdtylspnfifdcvelfq

SCOPe Domain Coordinates for d1nkga2:

Click to download the PDB-style file with coordinates for d1nkga2.
(The format of our PDB-style files is described here.)

Timeline for d1nkga2: