SCOPe 2.08: Domain d1njra_: 1njr A:

Lineage for d1njra_ (1njr A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.50: Macro domain-like [52948] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest

4. Superfamily c.50.1: Macro domain-like [52949] (4 families)

5. Family c.50.1.2: Macro domain [89724] (7 proteins)
   found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme

6. Protein Hypothetical protein Ymr087W [110654] (1 species)
   contains structural variations at both termini

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110655] (3 PDB entries)
   Uniprot Q04299

8. Domain d1njra_: 1njr A: [103858]
   complexed with xyl

Details for d1njra_

PDB Entry: 1njr, 1.9 Å

PDB Description: crystal structure of yeast ymx7, an adp-ribose-1''-monophosphatase

PDB Compounds: (A:) 32.1 kDa protein in ADH3-RCA1 intergenic region

SCOPe Domain Sequences for d1njra_:

Sequence, based on SEQRES records:

>d1njra_ c.50.1.2 (A:) Hypothetical protein Ymr087W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
kmriilcdtnevvtnlwqesiphayiqndkylcihhghlqslmdsmrkgdaihhghsyai
vspgnsygylgggfdkalynyfggkpfetwfrnqlggryhtvgsatvvdlqrcleektie
crdgiryiihvptvvapsapifnpqnplktgfepvfnamwnalmhspkdidgliipglct
gyagvppiiscksmafalrlymagdhiskelknvlimyylqypfepffpesckiecqklg
idiemlksfnvekdaielliprri

Sequence, based on observed residues (ATOM records):

>d1njra_ c.50.1.2 (A:) Hypothetical protein Ymr087W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
kmriilcdtnevvtnlwqesipkylcihhghlqslmdsmrkgdahsyaivspgnsygylg
ggfdkalynyfggkpfetwfrnqlggryhtvgsatvvdlqrcleecrdgiryiihvptvv
apsapifnpqnplktgfepvfnamwnalmhspkdidgliipglctgyagvppiiscksma
falrlymagdhiskelknvlimyylqypfepffpesckiecqklgidiemlksfnvekda
ielliprri

Timeline for d1njra_:

• d1njra_ first appeared in SCOP 1.69
  
• d1njra_ appears in SCOPe 2.07