Lineage for Species: Escherichia coli

  1. Root: SCOP 1.71
  2. 595667Class d: Alpha and beta proteins (a+b) [53931] (286 folds)
  3. 612721Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 612722Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (5 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 613175Family d.153.1.5: (Glycosyl)asparaginase [56261] (1 protein)
  6. 613176Protein Glycosylasparaginase (aspartylglucosaminidase, AGA) [56262] (3 species)
    the precursor chain is cleaved onto 2 fragments by autoproteolysis
  7. 613177Species Escherichia coli [TaxId:562] [103315] (3 PDB entries)
    isoaspartyl peptidase with L-asparaginase activity
    putative L-asparaginase YbiK

PDB entries in Species: Escherichia coli:

  1. Domain(s) for 1jn9:
    1. 613182Domain d1jn9.1: 1jn9 A:,B: [90898]
    2. 613183Domain d1jn9.2: 1jn9 C:,D: [90899]
      complexed with ca, cl, na
  2. Domain(s) for 1k2x:
    1. 613178Domain d1k2x.1: 1k2x A:,B: [90929]
    2. 613179Domain d1k2x.2: 1k2x C:,D: [90930]
      complexed with cl, na
  3. Domain(s) for 1t3m:
    1. 613180Domain d1t3m.1: 1t3m A:,B: [106361]
    2. 613181Domain d1t3m.2: 1t3m C:,D: [106362]
      complexed with na, no3

More info for Species Escherichia coli [TaxId:562] from d.153.1.5 Glycosylasparaginase (aspartylglucosaminidase, AGA)

Timeline for Species Escherichia coli [TaxId:562] from d.153.1.5 Glycosylasparaginase (aspartylglucosaminidase, AGA):