SCOPe 2.05: Family d.142.2.4: RNA ligase

Lineage for Family d.142.2.4: RNA ligase

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families)
   has a circularly permuted topology

5. Family d.142.2.4: RNA ligase [103286] (2 proteins)

Proteins:

1. RNA editing ligase MP52 [118125] (1 species)

   • Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [118126] (1 PDB entry)
     Uniprot P82863 52-316

2. RNA ligase 2, N-terminal domain [103287] (1 species)

   • Species Bacteriophage T4 [TaxId:10665] [103288] (1 PDB entry)

More info for Family d.142.2.4: RNA ligase

Timeline for Family d.142.2.4: RNA ligase:

• Family d.142.2.4: RNA ligase first appeared in SCOP 1.67, called Family d.142.2.4: RNA ligase 2, N-terminal domain
  
• Family d.142.2.4: RNA ligase appears in SCOPe 2.04
  
• Family d.142.2.4: RNA ligase appears in SCOPe 2.06
  
• Family d.142.2.4: RNA ligase appears in the current release, SCOPe 2.08