Lineage for Species: Methanocaldococcus jannaschii [TaxId: 2190]

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2971984Fold d.115: YrdC/RibB [55820] (1 superfamily)
    core: alpha-beta(2)-alpha-beta-alpha(2)-beta(2)-alpha-beta-alpha-beta; 3 layers; mixed twisted sheet of 7 strands; order 7126354; strands 7 and 1 are parallel to each other
  4. 2971985Superfamily d.115.1: YrdC/RibB [55821] (3 families) (S)
  5. 2972000Family d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64372] (2 proteins)
    contains one additional helix in the C-terminal extension
    automatically mapped to Pfam PF00926
  6. 2972001Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64373] (4 species)
  7. 2972014Species Methanocaldococcus jannaschii [TaxId:2190] [103219] (3 PDB entries)
    Uniprot Q60364

PDB entries in Species: Methanocaldococcus jannaschii [TaxId: 2190]:

  1. Domain(s) for 1pvw:
    1. 2972019Domain d1pvwa_: 1pvw A: [95192]
      complexed with ca, po4, zn
    2. 2972020Domain d1pvwb_: 1pvw B: [95193]
      complexed with ca, po4, zn
    3. 2972021Domain d1pvwc_: 1pvw C: [95194]
      complexed with ca, po4, zn
  2. Domain(s) for 1pvy:
    1. 2972017Domain d1pvya_: 1pvy A: [95195]
      complexed with 5rp, ca, zn
    2. 2972018Domain d1pvyb_: 1pvy B: [95196]
      complexed with 5rp, ca, zn
  3. Domain(s) for 1snn:
    1. 2972015Domain d1snna_: 1snn A: [105821]
      complexed with 5rp, ca, zn
    2. 2972016Domain d1snnb_: 1snn B: [105822]
      complexed with 5rp, ca, zn

More info for Species Methanocaldococcus jannaschii [TaxId:2190] from d.115.1.2 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB

Timeline for Species Methanocaldococcus jannaschii [TaxId:2190] from d.115.1.2 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB: