SCOPe 2.07: Protein: NADH pyrophosphatase

Lineage for Protein: NADH pyrophosphatase

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
Fold d.113: Nudix [55810] (1 superfamily)
beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet
contains beta-grasp motif
Superfamily d.113.1: Nudix [55811] (8 families)

Family d.113.1.4: NADH pyrophosphatase [103214] (1 protein)
duplication: consists of two structurally similar domains separated by a rubredoxin-like zinc finger; the N-terminal domain has a rudiment Nudix fold, the C-terminal, probably catalytic, domain has the canonical fold

Protein NADH pyrophosphatase [103215] (1 species)

Species:

Escherichia coli [TaxId:562] [103216] (2 PDB entries)
1. Domains for 1vk6:
  1. Domain d1vk6a2: 1vk6 A:126-256 [100852]
    Other proteins in same PDB: d1vk6a4, d1vk6a5
    structural genomics
    complexed with mpd, zn
  2. Domain d1vk6a3: 1vk6 A:1-96 [111609]
    Other proteins in same PDB: d1vk6a4, d1vk6a5
    structural genomics
    complexed with mpd, zn
2. Domains for 2gb5:
  1. Domain d2gb5a1: 2gb5 A:1-96 [204323]
    Other proteins in same PDB: d2gb5a2, d2gb5a4, d2gb5b2, d2gb5b4
    automated match to d1vk6a3
    complexed with zn
  2. Domain d2gb5a3: 2gb5 A:126-257 [204325]
    Other proteins in same PDB: d2gb5a2, d2gb5a4, d2gb5b2, d2gb5b4
    automated match to d1vk6a2
    complexed with zn
  3. Domain d2gb5b1: 2gb5 B:1-96 [204326]
    Other proteins in same PDB: d2gb5a2, d2gb5a4, d2gb5b2, d2gb5b4
    automated match to d1vk6a3
    complexed with zn
  4. Domain d2gb5b3: 2gb5 B:126-256 [204328]
    Other proteins in same PDB: d2gb5a2, d2gb5a4, d2gb5b2, d2gb5b4
    automated match to d1vk6a2
    complexed with zn

More info for Protein NADH pyrophosphatase from d.113.1.4: NADH pyrophosphatase

Timeline for Protein NADH pyrophosphatase from d.113.1.4: NADH pyrophosphatase:

Protein NADH pyrophosphatase from d.113.1.4: NADH pyrophosphatase first appeared in SCOP 1.67
Protein NADH pyrophosphatase from d.113.1.4: NADH pyrophosphatase appears in SCOPe 2.06
Protein NADH pyrophosphatase from d.113.1.4: NADH pyrophosphatase appears in the current release, SCOPe 2.08