SCOPe 2.01: Protein: Ribonuclease PH, domain 2

Lineage for Protein: Ribonuclease PH, domain 2

Root: SCOPe 2.01
Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
Fold d.101: Ribonuclease PH domain 2-like [55665] (1 superfamily)
beta(2)-alpha-beta(2)-alpha; 3 layers: alpha/beta/alpha; antiparallel sheet: order 2134
Superfamily d.101.1: Ribonuclease PH domain 2-like [55666] (1 family)
Family d.101.1.1: Ribonuclease PH domain 2-like [55667] (10 proteins)
Protein Ribonuclease PH, domain 2 [103150] (3 species)

Species:

Aquifex aeolicus [TaxId:63363] [103151] (4 PDB entries)
1. Domain for 1udn:
  - Domain d1udna2: 1udn A:151-255 [99214]
    Other proteins in same PDB: d1udna1
    complexed with po4, so4
2. Domain for 1udo:
  - Domain d1udoa2: 1udo A:151-255 [99216]
    Other proteins in same PDB: d1udoa1
    complexed with po4, so4; mutant
3. Domain for 1udq:
  - Domain d1udqa2: 1udq A:151-255 [99218]
    Other proteins in same PDB: d1udqa1
    complexed with po4, so4; mutant
4. Domain for 1uds:
  - Domain d1udsa2: 1uds A:151-255 [99220]
    Other proteins in same PDB: d1udsa1
    complexed with po4, so4; mutant
Bacillus subtilis [TaxId:1423] [103153] (3 PDB entries)
1. Domains for 1oyp:
  1. Domain d1oypa2: 1oyp A:152-243 [93735]
    Other proteins in same PDB: d1oypa1, d1oypb1, d1oypc1, d1oypd1, d1oype1, d1oypf1
    complexed with so4
  2. Domain d1oypb2: 1oyp B:152-243 [93737]
    Other proteins in same PDB: d1oypa1, d1oypb1, d1oypc1, d1oypd1, d1oype1, d1oypf1
    complexed with so4
  3. Domain d1oypc2: 1oyp C:152-243 [93739]
    Other proteins in same PDB: d1oypa1, d1oypb1, d1oypc1, d1oypd1, d1oype1, d1oypf1
    complexed with so4
  4. Domain d1oypd2: 1oyp D:152-243 [93741]
    Other proteins in same PDB: d1oypa1, d1oypb1, d1oypc1, d1oypd1, d1oype1, d1oypf1
    complexed with so4
  5. Domain d1oype2: 1oyp E:152-243 [93743]
    Other proteins in same PDB: d1oypa1, d1oypb1, d1oypc1, d1oypd1, d1oype1, d1oypf1
    complexed with so4
  6. Domain d1oypf2: 1oyp F:152-243 [93745]
    Other proteins in same PDB: d1oypa1, d1oypb1, d1oypc1, d1oypd1, d1oype1, d1oypf1
    complexed with so4
2. Domains for 1oyr:
  1. Domain d1oyra2: 1oyr A:152-242 [93747]
    Other proteins in same PDB: d1oyra1, d1oyrb1, d1oyrc1, d1oyrd1, d1oyre1, d1oyrf1
    complexed with cd, so4
  2. Domain d1oyrb2: 1oyr B:152-242 [93749]
    Other proteins in same PDB: d1oyra1, d1oyrb1, d1oyrc1, d1oyrd1, d1oyre1, d1oyrf1
    complexed with cd, so4
  3. Domain d1oyrc2: 1oyr C:152-242 [93751]
    Other proteins in same PDB: d1oyra1, d1oyrb1, d1oyrc1, d1oyrd1, d1oyre1, d1oyrf1
    complexed with cd, so4
  4. Domain d1oyrd2: 1oyr D:152-242 [93753]
    Other proteins in same PDB: d1oyra1, d1oyrb1, d1oyrc1, d1oyrd1, d1oyre1, d1oyrf1
    complexed with cd, so4
  5. Domain d1oyre2: 1oyr E:152-242 [93755]
    Other proteins in same PDB: d1oyra1, d1oyrb1, d1oyrc1, d1oyrd1, d1oyre1, d1oyrf1
    complexed with cd, so4
  6. Domain d1oyrf2: 1oyr F:152-242 [93757]
    Other proteins in same PDB: d1oyra1, d1oyrb1, d1oyrc1, d1oyrd1, d1oyre1, d1oyrf1
    complexed with cd, so4
3. Domain for 1oys:
  - Domain d1oysa2: 1oys A:152-237 [93759]
    Other proteins in same PDB: d1oysa1
Pseudomonas aeruginosa [TaxId:287] [103152] (2 PDB entries)
1. Domain for 1r6l:
  - Domain d1r6la2: 1r6l A:152-239 [97154]
    Other proteins in same PDB: d1r6la1
    complexed with nhe, so4
2. Domain for 1r6m:
  - Domain d1r6ma2: 1r6m A:152-239 [97156]
    Other proteins in same PDB: d1r6ma1
    protein/RNA complex; complexed with po4

More info for Protein Ribonuclease PH, domain 2 from d.101.1.1: Ribonuclease PH domain 2-like

Timeline for Protein Ribonuclease PH, domain 2 from d.101.1.1: Ribonuclease PH domain 2-like:

Protein Ribonuclease PH, domain 2 from d.101.1.1: Ribonuclease PH domain 2-like first appeared in SCOP 1.67
Protein Ribonuclease PH, domain 2 from d.101.1.1: Ribonuclease PH domain 2-like appears in SCOP 1.75
Protein Ribonuclease PH, domain 2 from d.101.1.1: Ribonuclease PH domain 2-like appears in SCOPe 2.02
Protein Ribonuclease PH, domain 2 from d.101.1.1: Ribonuclease PH domain 2-like appears in the current release, SCOPe 2.08