SCOPe 2.05: Family d.89.1.5: Relaxase domain

Lineage for Family d.89.1.5: Relaxase domain

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
   alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325

4. Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families)

5. Family d.89.1.5: Relaxase domain [103120] (3 proteins)
   circular permutation of the common fold
   automatically mapped to Pfam PF08751

Proteins:

1. F factor TraI relaxase [103121] (1 species)

   • Species Escherichia coli [TaxId:562] [103122] (1 PDB entry)

2. TrwC relaxase [103123] (1 species)

   • Species Escherichia coli [TaxId:562] [103124] (3 PDB entries)

3. automated matches [190037] (1 species)
   not a true protein

   • Species Escherichia coli [TaxId:562] [186757] (2 PDB entries)

More info for Family d.89.1.5: Relaxase domain

Timeline for Family d.89.1.5: Relaxase domain:

• Family d.89.1.5: Relaxase domain first appeared in SCOP 1.67
  
• Family d.89.1.5: Relaxase domain appears in SCOPe 2.04
  
• Family d.89.1.5: Relaxase domain appears in SCOPe 2.06
  
• Family d.89.1.5: Relaxase domain appears in the current release, SCOPe 2.08