Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2176307Superfamily d.58.18: ACT-like [55021] (15 families) (S)
    regulatory domain linked to a wide range of metabolic enzymes
  5. 2176351Family d.58.18.4: Nickel responsive regulator NikR, C-terminal domain [102999] (2 protein domains)
    automatically mapped to Pfam PF08753
  6. 2176352Protein Nickel responsive regulator NikR, C-terminal domain [103000] (2 species)
  7. 2176353Species Escherichia coli [TaxId:562] [103001] (8 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1q5v:
    1. 2176365Domain d1q5va2: 1q5v A:49-132 [95938]
      Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1
      apo form
    2. 2176366Domain d1q5vb2: 1q5v B:49-133 [95940]
      Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1
      apo form
    3. 2176367Domain d1q5vc2: 1q5v C:49-132 [95942]
      Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1
      apo form
    4. 2176368Domain d1q5vd2: 1q5v D:49-132 [95944]
      Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1
      apo form
  2. Domain(s) for 1q5y:
    1. 2176354Domain d1q5ya_: 1q5y A: [95950]
      nickel-bound; C-terminal domain only
      complexed with edo, ni
    2. 2176355Domain d1q5yb_: 1q5y B: [95951]
      nickel-bound; C-terminal domain only
      complexed with edo, ni
    3. 2176356Domain d1q5yc_: 1q5y C: [95952]
      nickel-bound; C-terminal domain only
      complexed with edo, ni
    4. 2176357Domain d1q5yd_: 1q5y D: [95953]
      nickel-bound; C-terminal domain only
      complexed with edo, ni
  3. Domain(s) for 2hza:
    1. 2176363Domain d2hzaa2: 2hza A:49-131 [136908]
      Other proteins in same PDB: d2hzaa1, d2hzab1
      automated match to d1q5va2
      complexed with 3cm, ni
    2. 2176364Domain d2hzab2: 2hza B:49-131 [136910]
      Other proteins in same PDB: d2hzaa1, d2hzab1
      automated match to d1q5va2
      complexed with 3cm, ni
  4. Domain(s) for 2hzv:
    1. 2176375Domain d2hzva2: 2hzv A:49-131 [136917]
      Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
      automated match to d1q5va2
      protein/DNA complex; complexed with k, ni
    2. 2176376Domain d2hzvb2: 2hzv B:49-131 [136919]
      Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
      automated match to d1q5va2
      protein/DNA complex; complexed with k, ni
    3. 2176377Domain d2hzvc2: 2hzv C:49-131 [136921]
      Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
      automated match to d1q5va2
      protein/DNA complex; complexed with k, ni
    4. 2176378Domain d2hzvd2: 2hzv D:49-131 [136923]
      Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
      automated match to d1q5va2
      protein/DNA complex; complexed with k, ni
    5. 2176379Domain d2hzve2: 2hzv E:49-131 [136925]
      Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
      automated match to d1q5va2
      protein/DNA complex; complexed with k, ni
    6. 2176380Domain d2hzvf2: 2hzv F:49-131 [136927]
      Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
      automated match to d1q5va2
      protein/DNA complex; complexed with k, ni
    7. 2176381Domain d2hzvg2: 2hzv G:49-131 [136929]
      Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
      automated match to d1q5va2
      protein/DNA complex; complexed with k, ni
    8. 2176382Domain d2hzvh2: 2hzv H:49-131 [136931]
      Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
      automated match to d1q5va2
      protein/DNA complex; complexed with k, ni
  5. Domain(s) for 3bkf:
  6. Domain(s) for 3bkt:
    1. 2176358Domain d3bkta_: 3bkt A: [155364]
      automated match to d1q5ya_
      complexed with cu
    2. 2176359Domain d3bktb_: 3bkt B: [155365]
      automated match to d1q5ya_
      complexed with cu
    3. 2176360Domain d3bktc_: 3bkt C: [155366]
      automated match to d1q5ya_
      complexed with cu
    4. 2176361Domain d3bktd_: 3bkt D: [155367]
      automated match to d1q5ya_
      complexed with cu
  7. Domain(s) for 3bku:
    1. 2176369Domain d3bkua_: 3bku A: [155368]
      automated match to d1q5ya_
    2. 2176370Domain d3bkub_: 3bku B: [155369]
      automated match to d1q5ya_
    3. 2176371Domain d3bkuc_: 3bku C: [155370]
      automated match to d1q5ya_
    4. 2176372Domain d3bkud_: 3bku D: [155371]
      automated match to d1q5ya_
  8. Domain(s) for 3od2:
    1. 2176373Domain d3od2a2: 3od2 A:49-132 [214312]
      Other proteins in same PDB: d3od2a1, d3od2b1
      automated match to d1q5va2
      complexed with 3cm, ni
    2. 2176374Domain d3od2b2: 3od2 B:49-132 [214314]
      Other proteins in same PDB: d3od2a1, d3od2b1
      automated match to d1q5va2
      complexed with 3cm, ni

More info for Species Escherichia coli [TaxId:562] from d.58.18.4 Nickel responsive regulator NikR, C-terminal domain

Timeline for Species Escherichia coli [TaxId:562] from d.58.18.4 Nickel responsive regulator NikR, C-terminal domain: