Lineage for Protein: Nickel responsive regulator NikR, C-terminal domain

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 861003Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 863190Superfamily d.58.18: ACT-like [55021] (14 families) (S)
    regulatory domain linked to a wide range of metabolic enzymes
  5. 863230Family d.58.18.4: Nickel responsive regulator NikR, C-terminal domain [102999] (1 protein)
  6. 863231Protein Nickel responsive regulator NikR, C-terminal domain [103000] (2 species)

Species:

  1. 863232Archaeon Pyrococcus horikoshii [TaxId:53953] [143375] (5 PDB entries)
    Uniprot O58316 51-132
    1. Domains for 2bj1:
      1. 863243Domain d2bj1a2: 2bj1 A:51-132 [128597]
        Other proteins in same PDB: d2bj1a1, d2bj1b1
        complexed with cl, ni
      2. 863244Domain d2bj1b2: 2bj1 B:51-132 [128599]
        Other proteins in same PDB: d2bj1a1, d2bj1b1
        automatically matched to 2BJ1 A:51-132
        complexed with cl, ni
    2. Domains for 2bj3:
      1. 863237Domain d2bj3a2: 2bj3 A:51-132 [128601]
        Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1
        automatically matched to 2BJ1 A:51-132
        complexed with cl, mg
      2. 863238Domain d2bj3b2: 2bj3 B:51-132 [128603]
        Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1
        automatically matched to 2BJ1 A:51-132
        complexed with cl, mg
      3. 863239Domain d2bj3c2: 2bj3 C:51-132 [128605]
        Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1
        automatically matched to 2BJ1 A:51-132
        complexed with cl, mg
      4. 863240Domain d2bj3d2: 2bj3 D:51-132 [128607]
        Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1
        automatically matched to 2BJ1 A:51-132
        complexed with cl, mg
    3. Domains for 2bj7:
      1. 863233Domain d2bj7a2: 2bj7 A:51-132 [128609]
        Other proteins in same PDB: d2bj7a1, d2bj7b1
        automatically matched to 2BJ1 A:51-132
        complexed with cl, edo, ni, pg4
      2. 863234Domain d2bj7b2: 2bj7 B:51-132 [128611]
        Other proteins in same PDB: d2bj7a1, d2bj7b1
        automatically matched to 2BJ1 A:51-132
        complexed with cl, edo, ni, pg4
    4. Domains for 2bj8:
      1. 863235Domain d2bj8a2: 2bj8 A:51-132 [128613]
        Other proteins in same PDB: d2bj8a1, d2bj8b1
        automatically matched to 2BJ1 A:51-132
        complexed with cl, edo, epe, ni, pg4
      2. 863236Domain d2bj8b2: 2bj8 B:51-132 [128615]
        Other proteins in same PDB: d2bj8a1, d2bj8b1
        automatically matched to 2BJ1 A:51-132
        complexed with cl, edo, epe, ni, pg4
    5. Domains for 2bj9:
      1. 863241Domain d2bj9a2: 2bj9 A:51-132 [128617]
        Other proteins in same PDB: d2bj9a1, d2bj9b1
        automatically matched to 2BJ1 A:51-132
        complexed with ni, pg4, po4
      2. 863242Domain d2bj9b2: 2bj9 B:51-132 [128619]
        Other proteins in same PDB: d2bj9a1, d2bj9b1
        automatically matched to 2BJ1 A:51-132
        complexed with ni, pg4, po4
  2. 863245Escherichia coli [TaxId:562] [103001] (7 PDB entries)
    1. Domains for 1q5v:
      1. 863257Domain d1q5va2: 1q5v A:49-132 [95938]
        Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1
        apo form
      2. 863258Domain d1q5vb2: 1q5v B:49-133 [95940]
        Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1
        apo form
      3. 863259Domain d1q5vc2: 1q5v C:49-132 [95942]
        Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1
        apo form
      4. 863260Domain d1q5vd2: 1q5v D:49-132 [95944]
        Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1
        apo form
    2. Domains for 1q5y:
      1. 863246Domain d1q5ya_: 1q5y A: [95950]
        nickel-bound; C-terminal domain only
      2. 863247Domain d1q5yb_: 1q5y B: [95951]
        nickel-bound; C-terminal domain only
      3. 863248Domain d1q5yc_: 1q5y C: [95952]
        nickel-bound; C-terminal domain only
      4. 863249Domain d1q5yd_: 1q5y D: [95953]
        nickel-bound; C-terminal domain only
        complexed with egl, ni
    3. Domains for 2hza:
      1. 863255Domain d2hzaa2: 2hza A:49-131 [136908]
        Other proteins in same PDB: d2hzaa1, d2hzab1
        automatically matched to d1q5vb2
        complexed with 3cm, ni
      2. 863256Domain d2hzab2: 2hza B:49-131 [136910]
        Other proteins in same PDB: d2hzaa1, d2hzab1
        automatically matched to d1q5vb2
        complexed with 3cm, ni
    4. Domains for 2hzv:
      1. 863265Domain d2hzva2: 2hzv A:49-131 [136917]
        Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
        automatically matched to d1q5vb2
        complexed with k, ni
      2. 863266Domain d2hzvb2: 2hzv B:49-131 [136919]
        Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
        automatically matched to d1q5vb2
        complexed with k, ni
      3. 863267Domain d2hzvc2: 2hzv C:49-131 [136921]
        Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
        automatically matched to d1q5vb2
        complexed with k, ni
      4. 863268Domain d2hzvd2: 2hzv D:49-131 [136923]
        Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
        automatically matched to d1q5vb2
        complexed with k, ni
      5. 863269Domain d2hzve2: 2hzv E:49-131 [136925]
        Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
        automatically matched to d1q5vb2
        complexed with k, ni
      6. 863270Domain d2hzvf2: 2hzv F:49-131 [136927]
        Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
        automatically matched to d1q5vb2
        complexed with k, ni
      7. 863271Domain d2hzvg2: 2hzv G:49-131 [136929]
        Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
        automatically matched to d1q5vb2
        complexed with k, ni
      8. 863272Domain d2hzvh2: 2hzv H:49-131 [136931]
        Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1
        automatically matched to d1q5vb2
        complexed with k, ni
    5. Domain for 3bkf:
    6. Domains for 3bkt:
      1. 863250Domain d3bkta1: 3bkt A:50-131 [155364]
        automatically matched to d1q5vb2
        complexed with cu
      2. 863251Domain d3bktb1: 3bkt B:50-131 [155365]
        automatically matched to d1q5vb2
        complexed with cu
      3. 863252Domain d3bktc1: 3bkt C:51-131 [155366]
        automatically matched to d1q5vb2
        complexed with cu
      4. 863253Domain d3bktd1: 3bkt D:50-131 [155367]
        automatically matched to d1q5vb2
        complexed with cu
    7. Domains for 3bku:
      1. 863261Domain d3bkua1: 3bku A:51-131 [155368]
        automatically matched to d1q5vb2
      2. 863262Domain d3bkub1: 3bku B:49-131 [155369]
        automatically matched to d1q5vb2
      3. 863263Domain d3bkuc1: 3bku C:51-131 [155370]
        automatically matched to d1q5vb2
      4. 863264Domain d3bkud1: 3bku D:50-131 [155371]
        automatically matched to d1q5vb2

More info for Protein Nickel responsive regulator NikR, C-terminal domain from d.58.18.4: Nickel responsive regulator NikR, C-terminal domain

Timeline for Protein Nickel responsive regulator NikR, C-terminal domain from d.58.18.4: Nickel responsive regulator NikR, C-terminal domain:

  • Protein Nickel responsive regulator NikR, C-terminal domain from d.58.18.4: Nickel responsive regulator NikR, C-terminal domain first appeared in SCOP 1.67
  • Protein Nickel responsive regulator NikR, C-terminal domain from d.58.18.4: Nickel responsive regulator NikR, C-terminal domain appears in SCOP 1.73
  • Protein Nickel responsive regulator NikR, C-terminal domain from d.58.18.4: Nickel responsive regulator NikR, C-terminal domain appears in SCOPe 2.01
  • Protein Nickel responsive regulator NikR, C-terminal domain from d.58.18.4: Nickel responsive regulator NikR, C-terminal domain appears in the current release, SCOPe 2.08