Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
Fold d.58: Ferredoxin-like [54861] (62 superfamilies) alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 |
Superfamily d.58.18: ACT-like [55021] (15 families) regulatory domain linked to a wide range of metabolic enzymes |
Family d.58.18.4: Nickel responsive regulator NikR, C-terminal domain [102999] (2 proteins) automatically mapped to Pfam PF08753 |
Protein Nickel responsive regulator NikR, C-terminal domain [103000] (2 species) |
Escherichia coli [TaxId:562] [103001] (8 PDB entries) |
Domain d1q5va2: 1q5v A:49-132 [95938] Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1 apo form missing some secondary structures that made up less than one-third of the common domain |
Domain d1q5vb2: 1q5v B:49-133 [95940] Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1 apo form missing some secondary structures that made up less than one-third of the common domain |
Domain d1q5vc2: 1q5v C:49-132 [95942] Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1 apo form missing some secondary structures that made up less than one-third of the common domain |
Domain d1q5vd2: 1q5v D:49-132 [95944] Other proteins in same PDB: d1q5va1, d1q5vb1, d1q5vc1, d1q5vd1 apo form |
Domain d1q5ya_: 1q5y A: [95950] nickel-bound; C-terminal domain only complexed with edo, ni |
Domain d1q5yb_: 1q5y B: [95951] nickel-bound; C-terminal domain only complexed with edo, ni |
Domain d1q5yc_: 1q5y C: [95952] nickel-bound; C-terminal domain only complexed with edo, ni |
Domain d1q5yd_: 1q5y D: [95953] nickel-bound; C-terminal domain only complexed with edo, ni |
Domain d2hzaa2: 2hza A:49-131 [136908] Other proteins in same PDB: d2hzaa1, d2hzab1 automated match to d1q5va2 complexed with 3cm, ni |
Domain d2hzab2: 2hza B:49-131 [136910] Other proteins in same PDB: d2hzaa1, d2hzab1 automated match to d1q5va2 complexed with 3cm, ni |
Domain d2hzva2: 2hzv A:49-131 [136917] Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1 automated match to d1q5va2 protein/DNA complex; complexed with k, ni |
Domain d2hzvb2: 2hzv B:49-131 [136919] Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1 automated match to d1q5va2 protein/DNA complex; complexed with k, ni |
Domain d2hzvc2: 2hzv C:49-131 [136921] Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1 automated match to d1q5va2 protein/DNA complex; complexed with k, ni |
Domain d2hzvd2: 2hzv D:49-131 [136923] Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1 automated match to d1q5va2 protein/DNA complex; complexed with k, ni |
Domain d2hzve2: 2hzv E:49-131 [136925] Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1 automated match to d1q5va2 protein/DNA complex; complexed with k, ni |
Domain d2hzvf2: 2hzv F:49-131 [136927] Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1 automated match to d1q5va2 protein/DNA complex; complexed with k, ni |
Domain d2hzvg2: 2hzv G:49-131 [136929] Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1 automated match to d1q5va2 protein/DNA complex; complexed with k, ni |
Domain d2hzvh2: 2hzv H:49-131 [136931] Other proteins in same PDB: d2hzva1, d2hzvb1, d2hzvc1, d2hzvd1, d2hzve1, d2hzvf1, d2hzvg1, d2hzvh1 automated match to d1q5va2 protein/DNA complex; complexed with k, ni |
Domain d3bkfa1: 3bkf A:49-131 [155353] automatically matched to d1q5vb2 complexed with zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3bkta_: 3bkt A: [155364] automated match to d1q5ya_ complexed with cu |
Domain d3bktb_: 3bkt B: [155365] automated match to d1q5ya_ complexed with cu |
Domain d3bktc_: 3bkt C: [155366] automated match to d1q5ya_ complexed with cu |
Domain d3bktd_: 3bkt D: [155367] automated match to d1q5ya_ complexed with cu |
Domain d3bkua_: 3bku A: [155368] automated match to d1q5ya_ missing some secondary structures that made up less than one-third of the common domain |
Domain d3bkub_: 3bku B: [155369] automated match to d1q5ya_ |
Domain d3bkuc_: 3bku C: [155370] automated match to d1q5ya_ |
Domain d3bkud_: 3bku D: [155371] automated match to d1q5ya_ missing some secondary structures that made up less than one-third of the common domain |
Domain d3od2a2: 3od2 A:49-132 [214312] Other proteins in same PDB: d3od2a1, d3od2b1 automated match to d1q5va2 complexed with 3cm, ni |
Domain d3od2b2: 3od2 B:49-132 [214314] Other proteins in same PDB: d3od2a1, d3od2b1 automated match to d1q5va2 complexed with 3cm, ni |
Pyrococcus horikoshii [TaxId:53953] [143375] (4 PDB entries) Uniprot O58316 51-132 |
Domain d2bj1a2: 2bj1 A:51-132 [128597] Other proteins in same PDB: d2bj1a1, d2bj1b1, d2bj1b2 complexed with cl, ni |
Domain d2bj3a2: 2bj3 A:51-136 [128601] Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1 automated match to d2bj1a2 complexed with cl, mg |
Domain d2bj3b2: 2bj3 B:51-138 [128603] Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1 automated match to d2bj1a2 complexed with cl, mg |
Domain d2bj3c2: 2bj3 C:51-138 [128605] Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1 automated match to d2bj1a2 complexed with cl, mg |
Domain d2bj3d2: 2bj3 D:51-134 [128607] Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1 automated match to d2bj1a2 complexed with cl, mg |
Domain d2bj7a2: 2bj7 A:51-137 [128609] Other proteins in same PDB: d2bj7a1, d2bj7b1 automated match to d2bj1a2 complexed with cl, edo, ni, pg4 |
Domain d2bj7b2: 2bj7 B:51-138 [128611] Other proteins in same PDB: d2bj7a1, d2bj7b1 automated match to d2bj1a2 complexed with cl, edo, ni, pg4 |
Domain d2bj8a2: 2bj8 A:51-137 [128613] Other proteins in same PDB: d2bj8a1, d2bj8b1 automated match to d2bj1a2 complexed with cl, edo, epe, ni, pg4 |
Domain d2bj8b2: 2bj8 B:51-138 [128615] Other proteins in same PDB: d2bj8a1, d2bj8b1 automated match to d2bj1a2 complexed with cl, edo, epe, ni, pg4 |
Timeline for Protein Nickel responsive regulator NikR, C-terminal domain from d.58.18.4: Nickel responsive regulator NikR, C-terminal domain: