Lineage for Species: Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2172847Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (24 families) (S)
    dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
  5. 2172861Family d.58.4.2: Lrp/AsnC-like transcriptional regulator C-terminal domain [69733] (5 protein domains)
    octamer: tetramer of dimers
    automatically mapped to Pfam PF01037
  6. 2172866Protein Putative transcriptional regulator PH1519 [102968] (1 species)
    archaeal feast/famine regulatory protein
  7. 2172867Species Pyrococcus horikoshii [TaxId:53953] [102969] (4 PDB entries)
    identical sequence to Pyrococcus sp. ot3 protein

PDB entries in Species: Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 1ri7:
  2. Domain(s) for 2e1c:
  3. Domain(s) for 2zny:
    1. 2172878Domain d2znya2: 2zny A:85-170 [207901]
      Other proteins in same PDB: d2znya1, d2znyb1, d2znyc1, d2znyd1, d2znye1, d2znyf1, d2znyg1, d2znyh1
      automated match to d1ri7a2
      complexed with arg
    2. 2172879Domain d2znyb2: 2zny B:85-170 [207903]
      Other proteins in same PDB: d2znya1, d2znyb1, d2znyc1, d2znyd1, d2znye1, d2znyf1, d2znyg1, d2znyh1
      automated match to d1ri7a2
      complexed with arg
    3. 2172880Domain d2znyc2: 2zny C:85-170 [207905]
      Other proteins in same PDB: d2znya1, d2znyb1, d2znyc1, d2znyd1, d2znye1, d2znyf1, d2znyg1, d2znyh1
      automated match to d1ri7a2
      complexed with arg
    4. 2172881Domain d2znyd2: 2zny D:85-170 [207907]
      Other proteins in same PDB: d2znya1, d2znyb1, d2znyc1, d2znyd1, d2znye1, d2znyf1, d2znyg1, d2znyh1
      automated match to d1ri7a2
      complexed with arg
    5. 2172882Domain d2znye2: 2zny E:85-170 [207909]
      Other proteins in same PDB: d2znya1, d2znyb1, d2znyc1, d2znyd1, d2znye1, d2znyf1, d2znyg1, d2znyh1
      automated match to d1ri7a2
      complexed with arg
    6. 2172883Domain d2znyf2: 2zny F:85-170 [207911]
      Other proteins in same PDB: d2znya1, d2znyb1, d2znyc1, d2znyd1, d2znye1, d2znyf1, d2znyg1, d2znyh1
      automated match to d1ri7a2
      complexed with arg
    7. 2172884Domain d2znyg2: 2zny G:85-170 [207913]
      Other proteins in same PDB: d2znya1, d2znyb1, d2znyc1, d2znyd1, d2znye1, d2znyf1, d2znyg1, d2znyh1
      automated match to d1ri7a2
      complexed with arg
    8. 2172885Domain d2znyh2: 2zny H:85-170 [207915]
      Other proteins in same PDB: d2znya1, d2znyb1, d2znyc1, d2znyd1, d2znye1, d2znyf1, d2znyg1, d2znyh1
      automated match to d1ri7a2
      complexed with arg
  4. Domain(s) for 2znz:
    1. 2172869Domain d2znza2: 2znz A:85-170 [207917]
      Other proteins in same PDB: d2znza1, d2znzb1, d2znzc1, d2znzd1, d2znze1, d2znzf1, d2znzg1, d2znzh1
      automated match to d1ri7a2
      complexed with lys
    2. 2172870Domain d2znzb2: 2znz B:85-170 [207919]
      Other proteins in same PDB: d2znza1, d2znzb1, d2znzc1, d2znzd1, d2znze1, d2znzf1, d2znzg1, d2znzh1
      automated match to d1ri7a2
      complexed with lys
    3. 2172871Domain d2znzc2: 2znz C:85-170 [207921]
      Other proteins in same PDB: d2znza1, d2znzb1, d2znzc1, d2znzd1, d2znze1, d2znzf1, d2znzg1, d2znzh1
      automated match to d1ri7a2
      complexed with lys
    4. 2172872Domain d2znzd2: 2znz D:85-170 [207923]
      Other proteins in same PDB: d2znza1, d2znzb1, d2znzc1, d2znzd1, d2znze1, d2znzf1, d2znzg1, d2znzh1
      automated match to d1ri7a2
      complexed with lys
    5. 2172873Domain d2znze2: 2znz E:85-170 [207925]
      Other proteins in same PDB: d2znza1, d2znzb1, d2znzc1, d2znzd1, d2znze1, d2znzf1, d2znzg1, d2znzh1
      automated match to d1ri7a2
      complexed with lys
    6. 2172874Domain d2znzf2: 2znz F:85-170 [207927]
      Other proteins in same PDB: d2znza1, d2znzb1, d2znzc1, d2znzd1, d2znze1, d2znzf1, d2znzg1, d2znzh1
      automated match to d1ri7a2
      complexed with lys
    7. 2172875Domain d2znzg2: 2znz G:85-170 [207929]
      Other proteins in same PDB: d2znza1, d2znzb1, d2znzc1, d2znzd1, d2znze1, d2znzf1, d2znzg1, d2znzh1
      automated match to d1ri7a2
      complexed with lys
    8. 2172876Domain d2znzh2: 2znz H:85-170 [207931]
      Other proteins in same PDB: d2znza1, d2znzb1, d2znzc1, d2znzd1, d2znze1, d2znzf1, d2znzg1, d2znzh1
      automated match to d1ri7a2
      complexed with lys

More info for Species Pyrococcus horikoshii [TaxId:53953] from d.58.4.2 Putative transcriptional regulator PH1519

Timeline for Species Pyrococcus horikoshii [TaxId:53953] from d.58.4.2 Putative transcriptional regulator PH1519: