SCOPe 2.08: Species: Archaeoglobus fulgidus [TaxId: 2234]

Lineage for Species: Archaeoglobus fulgidus [TaxId: 2234]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families)
Family d.218.1.7: Archaeal tRNA CCA-adding enzyme catalytic domain [102940] (1 protein)
similar overall structure to poly(A) polymerase, PAP
Protein tRNA nucleotidyltransferase, N-terminal domain [102941] (1 species)
Species Archaeoglobus fulgidus [TaxId:2234] [102942] (26 PDB entries)
Uniprot O28126

PDB entries in Species: Archaeoglobus fulgidus [TaxId: 2234]:

Domain(s) for 1r89:
- Domain d1r89a2: 1r89 A:1-142 [97222]
  Other proteins in same PDB: d1r89a1, d1r89a3
  complexed with cl, ctp, mg, mn, na
Domain(s) for 1r8a:
- Domain d1r8aa2: 1r8a A:1-142 [97225]
  Other proteins in same PDB: d1r8aa1, d1r8aa3
  complexed with mn, na
Domain(s) for 1r8b:
- Domain d1r8ba2: 1r8b A:1-142 [97228]
  Other proteins in same PDB: d1r8ba1, d1r8ba3
  complexed with atp, cl, mg, mn, na
Domain(s) for 1r8c:
- Domain d1r8ca2: 1r8c A:1-142 [97231]
  Other proteins in same PDB: d1r8ca1, d1r8ca3
  complexed with mn, na, utp
Domain(s) for 1sz1:
1. Domain d1sz1a2: 1sz1 A:1-142 [106134]
  Other proteins in same PDB: d1sz1a1, d1sz1a3, d1sz1b1, d1sz1b3
  protein/RNA complex
2. Domain d1sz1b2: 1sz1 B:1-142 [106137]
  Other proteins in same PDB: d1sz1a1, d1sz1a3, d1sz1b1, d1sz1b3
  protein/RNA complex
Domain(s) for 1tfw:
1. Domain d1tfwa2: 1tfw A:1-142 [106863]
  Other proteins in same PDB: d1tfwa1, d1tfwa3, d1tfwb1, d1tfwb3, d1tfwc1, d1tfwc3, d1tfwd1, d1tfwd3
  protein/RNA complex; complexed with atp, mg
2. Domain d1tfwb2: 1tfw B:1-142 [106866]
  Other proteins in same PDB: d1tfwa1, d1tfwa3, d1tfwb1, d1tfwb3, d1tfwc1, d1tfwc3, d1tfwd1, d1tfwd3
  protein/RNA complex; complexed with atp, mg
3. Domain d1tfwc2: 1tfw C:1-142 [106869]
  Other proteins in same PDB: d1tfwa1, d1tfwa3, d1tfwb1, d1tfwb3, d1tfwc1, d1tfwc3, d1tfwd1, d1tfwd3
  protein/RNA complex; complexed with atp, mg
4. Domain d1tfwd2: 1tfw D:1-142 [106872]
  Other proteins in same PDB: d1tfwa1, d1tfwa3, d1tfwb1, d1tfwb3, d1tfwc1, d1tfwc3, d1tfwd1, d1tfwd3
  protein/RNA complex; complexed with atp, mg
Domain(s) for 1tfy:
1. Domain d1tfya2: 1tfy A:1-142 [106875]
  Other proteins in same PDB: d1tfya1, d1tfya3, d1tfyb1, d1tfyb3, d1tfyc1, d1tfyc3, d1tfyd1, d1tfyd3
  protein/RNA complex; complexed with ctp, mg
2. Domain d1tfyb2: 1tfy B:1-142 [106878]
  Other proteins in same PDB: d1tfya1, d1tfya3, d1tfyb1, d1tfyb3, d1tfyc1, d1tfyc3, d1tfyd1, d1tfyd3
  protein/RNA complex; complexed with ctp, mg
3. Domain d1tfyc2: 1tfy C:1-142 [106881]
  Other proteins in same PDB: d1tfya1, d1tfya3, d1tfyb1, d1tfyb3, d1tfyc1, d1tfyc3, d1tfyd1, d1tfyd3
  protein/RNA complex; complexed with ctp, mg
4. Domain d1tfyd2: 1tfy D:1-142 [106884]
  Other proteins in same PDB: d1tfya1, d1tfya3, d1tfyb1, d1tfyb3, d1tfyc1, d1tfyc3, d1tfyd1, d1tfyd3
  protein/RNA complex; complexed with ctp, mg
Domain(s) for 1uet:
- Domain d1ueta2: 1uet A:2-142 [99273]
  Other proteins in same PDB: d1ueta1, d1ueta3
  complexed with act, ca, mg
Domain(s) for 1ueu:
- Domain d1ueua2: 1ueu A:2-142 [99276]
  Other proteins in same PDB: d1ueua1, d1ueua3
  complexed with act, ctp, mg
Domain(s) for 1uev:
- Domain d1ueva2: 1uev A:2-142 [99279]
  Other proteins in same PDB: d1ueva1, d1ueva3
  complexed with atp, ca, mg
Domain(s) for 2dr5:
- Domain d2dr5a2: 2dr5 A:1-142 [131655]
  Other proteins in same PDB: d2dr5a1, d2dr5a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2dr7:
- Domain d2dr7a2: 2dr7 A:1-142 [131658]
  Other proteins in same PDB: d2dr7a1, d2dr7a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2dr8:
- Domain d2dr8a2: 2dr8 A:1-142 [131661]
  Other proteins in same PDB: d2dr8a1, d2dr8a3
  automated match to d1r89a2
  protein/RNA complex; complexed with ctp, mg, so4
Domain(s) for 2dr9:
- Domain d2dr9a2: 2dr9 A:1-142 [131664]
  Other proteins in same PDB: d2dr9a1, d2dr9a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2dra:
- Domain d2draa2: 2dra A:1-142 [131667]
  Other proteins in same PDB: d2draa1, d2draa3
  automated match to d1r89a2
  protein/RNA complex; complexed with atp, mg, so4
Domain(s) for 2drb:
- Domain d2drba2: 2drb A:1-142 [131670]
  Other proteins in same PDB: d2drba1, d2drba3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2dvi:
- Domain d2dvia2: 2dvi A:3-142 [131791]
  Other proteins in same PDB: d2dvia1, d2dvia3
  automated match to d1r89a2
  protein/RNA complex; complexed with ctp, mg, so4
Domain(s) for 2zh1:
- Domain d2zh1a2: 2zh1 A:1-142 [154434]
  Other proteins in same PDB: d2zh1a1, d2zh1a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2zh2:
- Domain d2zh2a2: 2zh2 A:1-142 [154437]
  Other proteins in same PDB: d2zh2a1, d2zh2a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2zh3:
- Domain d2zh3a2: 2zh3 A:1-142 [154440]
  Other proteins in same PDB: d2zh3a1, d2zh3a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2zh4:
- Domain d2zh4a2: 2zh4 A:1-142 [154443]
  Other proteins in same PDB: d2zh4a1, d2zh4a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2zh5:
- Domain d2zh5a2: 2zh5 A:1-142 [154446]
  Other proteins in same PDB: d2zh5a1, d2zh5a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2zh6:
- Domain d2zh6a2: 2zh6 A:1-142 [154449]
  Other proteins in same PDB: d2zh6a1, d2zh6a3
  automated match to d1r89a2
  protein/RNA complex; complexed with atp, mg, so4
Domain(s) for 2zh8:
- Domain d2zh8a2: 2zh8 A:1-142 [154455]
  Other proteins in same PDB: d2zh8a1, d2zh8a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2zh9:
- Domain d2zh9a2: 2zh9 A:1-142 [154458]
  Other proteins in same PDB: d2zh9a1, d2zh9a3
  automated match to d1r89a2
  protein/RNA complex; complexed with so4
Domain(s) for 2zha:
- Domain d2zhaa2: 2zha A:1-142 [154461]
  Other proteins in same PDB: d2zhaa1, d2zhaa3
  automated match to d1r89a2
  protein/RNA complex; complexed with ctp, mg, so4

More info for Species Archaeoglobus fulgidus [TaxId:2234] from d.218.1.7 tRNA nucleotidyltransferase, N-terminal domain

Timeline for Species Archaeoglobus fulgidus [TaxId:2234] from d.218.1.7 tRNA nucleotidyltransferase, N-terminal domain:

Species Archaeoglobus fulgidus [TaxId:2234] from d.218.1.7 tRNA nucleotidyltransferase, N-terminal domain first appeared in SCOP 1.67, called Species Archaeon Archaeoglobus fulgidus [TaxId:2234] from d.218.1.7 tRNA nucleotidyltransferase, N-terminal domain
Species Archaeoglobus fulgidus [TaxId:2234] from d.218.1.7 tRNA nucleotidyltransferase, N-terminal domain appears in SCOPe 2.07