SCOPe 2.07: Protein: tRNA nucleotidyltransferase, N-terminal domain

Lineage for Protein: tRNA nucleotidyltransferase, N-terminal domain

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families)
Family d.218.1.7: Archaeal tRNA CCA-adding enzyme catalytic domain [102940] (1 protein)
similar overall structure to poly(A) polymerase, PAP
Protein tRNA nucleotidyltransferase, N-terminal domain [102941] (1 species)

Species:

Archaeoglobus fulgidus [TaxId:2234] [102942] (26 PDB entries)
Uniprot O28126
1. Domain for 1r89:
  - Domain d1r89a2: 1r89 A:1-142 [97222]
    Other proteins in same PDB: d1r89a1, d1r89a3
    complexed with cl, ctp, mg, mn, na
2. Domain for 1r8a:
  - Domain d1r8aa2: 1r8a A:1-142 [97225]
    Other proteins in same PDB: d1r8aa1, d1r8aa3
    complexed with mn, na
3. Domain for 1r8b:
  - Domain d1r8ba2: 1r8b A:1-142 [97228]
    Other proteins in same PDB: d1r8ba1, d1r8ba3
    complexed with atp, cl, mg, mn, na
4. Domain for 1r8c:
  - Domain d1r8ca2: 1r8c A:1-142 [97231]
    Other proteins in same PDB: d1r8ca1, d1r8ca3
    complexed with mn, na, utp
5. Domains for 1sz1:
  1. Domain d1sz1a2: 1sz1 A:1-142 [106134]
    Other proteins in same PDB: d1sz1a1, d1sz1a3, d1sz1b1, d1sz1b3
    protein/RNA complex
  2. Domain d1sz1b2: 1sz1 B:1-142 [106137]
    Other proteins in same PDB: d1sz1a1, d1sz1a3, d1sz1b1, d1sz1b3
    protein/RNA complex
6. Domains for 1tfw:
  1. Domain d1tfwa2: 1tfw A:1-142 [106863]
    Other proteins in same PDB: d1tfwa1, d1tfwa3, d1tfwb1, d1tfwb3, d1tfwc1, d1tfwc3, d1tfwd1, d1tfwd3
    protein/RNA complex; complexed with atp, mg
  2. Domain d1tfwb2: 1tfw B:1-142 [106866]
    Other proteins in same PDB: d1tfwa1, d1tfwa3, d1tfwb1, d1tfwb3, d1tfwc1, d1tfwc3, d1tfwd1, d1tfwd3
    protein/RNA complex; complexed with atp, mg
  3. Domain d1tfwc2: 1tfw C:1-142 [106869]
    Other proteins in same PDB: d1tfwa1, d1tfwa3, d1tfwb1, d1tfwb3, d1tfwc1, d1tfwc3, d1tfwd1, d1tfwd3
    protein/RNA complex; complexed with atp, mg
  4. Domain d1tfwd2: 1tfw D:1-142 [106872]
    Other proteins in same PDB: d1tfwa1, d1tfwa3, d1tfwb1, d1tfwb3, d1tfwc1, d1tfwc3, d1tfwd1, d1tfwd3
    protein/RNA complex; complexed with atp, mg
7. Domains for 1tfy:
  1. Domain d1tfya2: 1tfy A:1-142 [106875]
    Other proteins in same PDB: d1tfya1, d1tfya3, d1tfyb1, d1tfyb3, d1tfyc1, d1tfyc3, d1tfyd1, d1tfyd3
    protein/RNA complex; complexed with ctp, mg
  2. Domain d1tfyb2: 1tfy B:1-142 [106878]
    Other proteins in same PDB: d1tfya1, d1tfya3, d1tfyb1, d1tfyb3, d1tfyc1, d1tfyc3, d1tfyd1, d1tfyd3
    protein/RNA complex; complexed with ctp, mg
  3. Domain d1tfyc2: 1tfy C:1-142 [106881]
    Other proteins in same PDB: d1tfya1, d1tfya3, d1tfyb1, d1tfyb3, d1tfyc1, d1tfyc3, d1tfyd1, d1tfyd3
    protein/RNA complex; complexed with ctp, mg
  4. Domain d1tfyd2: 1tfy D:1-142 [106884]
    Other proteins in same PDB: d1tfya1, d1tfya3, d1tfyb1, d1tfyb3, d1tfyc1, d1tfyc3, d1tfyd1, d1tfyd3
    protein/RNA complex; complexed with ctp, mg
8. Domain for 1uet:
  - Domain d1ueta2: 1uet A:2-142 [99273]
    Other proteins in same PDB: d1ueta1, d1ueta3
    complexed with act, ca, mg
9. Domain for 1ueu:
  - Domain d1ueua2: 1ueu A:2-142 [99276]
    Other proteins in same PDB: d1ueua1, d1ueua3
    complexed with act, ctp, mg
10. Domain for 1uev:
  - Domain d1ueva2: 1uev A:2-142 [99279]
    Other proteins in same PDB: d1ueva1, d1ueva3
    complexed with atp, ca, mg
11. Domain for 2dr5:
  - Domain d2dr5a2: 2dr5 A:1-142 [131655]
    Other proteins in same PDB: d2dr5a1, d2dr5a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
12. Domain for 2dr7:
  - Domain d2dr7a2: 2dr7 A:1-142 [131658]
    Other proteins in same PDB: d2dr7a1, d2dr7a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
13. Domain for 2dr8:
  - Domain d2dr8a2: 2dr8 A:1-142 [131661]
    Other proteins in same PDB: d2dr8a1, d2dr8a3
    automated match to d1r89a2
    protein/RNA complex; complexed with ctp, mg, so4
14. Domain for 2dr9:
  - Domain d2dr9a2: 2dr9 A:1-142 [131664]
    Other proteins in same PDB: d2dr9a1, d2dr9a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
15. Domain for 2dra:
  - Domain d2draa2: 2dra A:1-142 [131667]
    Other proteins in same PDB: d2draa1, d2draa3
    automated match to d1r89a2
    protein/RNA complex; complexed with atp, mg, so4
16. Domain for 2drb:
  - Domain d2drba2: 2drb A:1-142 [131670]
    Other proteins in same PDB: d2drba1, d2drba3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
17. Domain for 2dvi:
  - Domain d2dvia2: 2dvi A:3-142 [131791]
    Other proteins in same PDB: d2dvia1, d2dvia3
    automated match to d1r89a2
    protein/RNA complex; complexed with ctp, mg, so4
18. Domain for 2zh1:
  - Domain d2zh1a2: 2zh1 A:1-142 [154434]
    Other proteins in same PDB: d2zh1a1, d2zh1a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
19. Domain for 2zh2:
  - Domain d2zh2a2: 2zh2 A:1-142 [154437]
    Other proteins in same PDB: d2zh2a1, d2zh2a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
20. Domain for 2zh3:
  - Domain d2zh3a2: 2zh3 A:1-142 [154440]
    Other proteins in same PDB: d2zh3a1, d2zh3a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
21. Domain for 2zh4:
  - Domain d2zh4a2: 2zh4 A:1-142 [154443]
    Other proteins in same PDB: d2zh4a1, d2zh4a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
22. Domain for 2zh5:
  - Domain d2zh5a2: 2zh5 A:1-142 [154446]
    Other proteins in same PDB: d2zh5a1, d2zh5a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
23. Domain for 2zh6:
  - Domain d2zh6a2: 2zh6 A:1-142 [154449]
    Other proteins in same PDB: d2zh6a1, d2zh6a3
    automated match to d1r89a2
    protein/RNA complex; complexed with atp, mg, so4
24. Domain for 2zh8:
  - Domain d2zh8a2: 2zh8 A:1-142 [154455]
    Other proteins in same PDB: d2zh8a1, d2zh8a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
25. Domain for 2zh9:
  - Domain d2zh9a2: 2zh9 A:1-142 [154458]
    Other proteins in same PDB: d2zh9a1, d2zh9a3
    automated match to d1r89a2
    protein/RNA complex; complexed with so4
26. Domain for 2zha:
  - Domain d2zhaa2: 2zha A:1-142 [154461]
    Other proteins in same PDB: d2zhaa1, d2zhaa3
    automated match to d1r89a2
    protein/RNA complex; complexed with ctp, mg, so4

More info for Protein tRNA nucleotidyltransferase, N-terminal domain from d.218.1.7: Archaeal tRNA CCA-adding enzyme catalytic domain

Timeline for Protein tRNA nucleotidyltransferase, N-terminal domain from d.218.1.7: Archaeal tRNA CCA-adding enzyme catalytic domain:

Protein tRNA nucleotidyltransferase, N-terminal domain from d.218.1.7: Archaeal tRNA CCA-adding enzyme catalytic domain first appeared in SCOP 1.67
Protein tRNA nucleotidyltransferase, N-terminal domain from d.218.1.7: Archaeal tRNA CCA-adding enzyme catalytic domain appears in SCOPe 2.06
Protein tRNA nucleotidyltransferase, N-terminal domain from d.218.1.7: Archaeal tRNA CCA-adding enzyme catalytic domain appears in the current release, SCOPe 2.08