Lineage for Protein: B-cell lymphoma 6 (Bcl6) protein BTB domain

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2945442Fold d.42: POZ domain [54694] (1 superfamily)
    core: beta(2)-alpha(2)-beta(2)-alpha(2); 2 layers a/b; mixed sheet: 2143
  4. 2945443Superfamily d.42.1: POZ domain [54695] (3 families) (S)
  5. 2945444Family d.42.1.1: BTB/POZ domain [54696] (6 proteins)
  6. 2945445Protein B-cell lymphoma 6 (Bcl6) protein BTB domain [102922] (1 species)

Species:

  • 2945446Human (Homo sapiens) [TaxId:9606] [102923] (37 PDB entries)
    1. Domains for 1r28:
      1. 2945472Domain d1r28a_: 1r28 A: [96854]
        has additional insertions and/or extensions that are not grouped together
      2. 2945473Domain d1r28b_: 1r28 B: [96855]
        has additional insertions and/or extensions that are not grouped together
    2. Domain for 1r29:
      • 2945447Domain d1r29a_: 1r29 A: [96856]
        has additional insertions and/or extensions that are not grouped together
    3. Domains for 1r2b:
      1. 2945480Domain d1r2ba_: 1r2b A: [96857]
        has additional insertions and/or extensions that are not grouped together
      2. 2945481Domain d1r2bb_: 1r2b B: [96858]
        has additional insertions and/or extensions that are not grouped together
    4. Domains for 3bim:
      1. 2945506Domain d3bima_: 3bim A: [155311]
        automated match to d1r2ba_
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
      2. 2945507Domain d3bimb_: 3bim B: [155312]
        automated match to d1r2ba_
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
      3. 2945508Domain d3bimc_: 3bim C: [155313]
        automated match to d1r2ba_
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
      4. 2945509Domain d3bimd_: 3bim D: [155314]
        automated match to d1r2ba_
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
      5. 2945510Domain d3bime_: 3bim E: [155315]
        automated match to d1r2ba_
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
      6. 2945511Domain d3bimf_: 3bim F: [155316]
        automated match to d1r2ba_
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
      7. 2945512Domain d3bimg_: 3bim G: [155317]
        automated match to d1r2ba_
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
      8. 2945513Domain d3bimh_: 3bim H: [155318]
        automated match to d1r2ba_
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
    5. Domains for 3e4u:
      1. 2945474Domain d3e4ua_: 3e4u A: [174657]
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      2. 2945475Domain d3e4ub_: 3e4u B: [174658]
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      3. 2945476Domain d3e4uc_: 3e4u C: [174659]
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      4. 2945477Domain d3e4ud_: 3e4u D: [174660]
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      5. 2945478Domain d3e4ue_: 3e4u E: [174661]
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      6. 2945479Domain d3e4uf_: 3e4u F: [174662]
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
    6. Domains for 3lbz:
      1. 2945489Domain d3lbza_: 3lbz A: [180169]
        automated match to d1r2ba_
        complexed with z88, z89
        has additional insertions and/or extensions that are not grouped together
      2. 2945490Domain d3lbzb_: 3lbz B: [180170]
        automated match to d1r2ba_
        complexed with z88, z89
        has additional insertions and/or extensions that are not grouped together
    7. Domains for 4u2m:
      1. 2945494Domain d4u2ma1: 4u2m A:2-109 [261994]
        Other proteins in same PDB: d4u2mb3, d4u2mc3, d4u2md3
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      2. 2945495Domain d4u2ma2: 4u2m A:128-250 [261995]
        Other proteins in same PDB: d4u2mb3, d4u2mc3, d4u2md3
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      3. 2945496Domain d4u2mb1: 4u2m B:2-109 [261996]
        Other proteins in same PDB: d4u2mb3, d4u2mc3, d4u2md3
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      4. 2945497Domain d4u2mb2: 4u2m B:128-250 [262001]
        Other proteins in same PDB: d4u2mb3, d4u2mc3, d4u2md3
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      5. 2945498Domain d4u2mc1: 4u2m C:2-109 [261610]
        Other proteins in same PDB: d4u2mb3, d4u2mc3, d4u2md3
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      6. 2945499Domain d4u2mc2: 4u2m C:128-250 [261612]
        Other proteins in same PDB: d4u2mb3, d4u2mc3, d4u2md3
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      7. 2945500Domain d4u2md1: 4u2m D:2-109 [261611]
        Other proteins in same PDB: d4u2mb3, d4u2mc3, d4u2md3
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
      8. 2945501Domain d4u2md2: 4u2m D:128-250 [261613]
        Other proteins in same PDB: d4u2mb3, d4u2mc3, d4u2md3
        automated match to d1r2ba_
        has additional insertions and/or extensions that are not grouped together
    8. Domain for 5mw2:
      • 2945503Domain d5mw2a_: 5mw2 A: [339797]
        automated match to d1r2ba_
        complexed with u52
        has additional insertions and/or extensions that are not grouped together
    9. Domains for 5mw6:
      1. 2945464Domain d5mw6a_: 5mw6 A: [339810]
        automated match to d1r2ba_
        complexed with rc0
        has additional insertions and/or extensions that are not grouped together
      2. 2945465Domain d5mw6b_: 5mw6 B: [339806]
        automated match to d1r2ba_
        complexed with rc0
        has additional insertions and/or extensions that are not grouped together
    10. Domain for 5mwd:
      • 2945484Domain d5mwda_: 5mwd A: [339787]
        automated match to d1r2ba_
        complexed with tj3
        has additional insertions and/or extensions that are not grouped together
    11. Domains for 5n1x:
      1. 2945468Domain d5n1xa1: 5n1x A:9-128 [334295]
        Other proteins in same PDB: d5n1xa2, d5n1xd2
        automated match to d1r29a_
        complexed with 8hh
        has additional insertions and/or extensions that are not grouped together
      2. 2945469Domain d5n1xb_: 5n1x B: [334247]
        Other proteins in same PDB: d5n1xa2, d5n1xd2
        automated match to d1r29a_
        complexed with 8hh
        has additional insertions and/or extensions that are not grouped together
      3. 2945470Domain d5n1xc_: 5n1x C: [334234]
        Other proteins in same PDB: d5n1xa2, d5n1xd2
        automated match to d1r29a_
        complexed with 8hh
        has additional insertions and/or extensions that are not grouped together
      4. 2945471Domain d5n1xd1: 5n1x D:9-125 [334422]
        Other proteins in same PDB: d5n1xa2, d5n1xd2
        automated match to d1r29a_
        complexed with 8hh
        has additional insertions and/or extensions that are not grouped together
    12. Domain for 5n1z:
      • 2945483Domain d5n1za_: 5n1z A: [334220]
        automated match to d1r2ba_
        complexed with 8gq, cl
        has additional insertions and/or extensions that are not grouped together
    13. Domain for 5n20:
      • 2945450Domain d5n20a_: 5n20 A: [334232]
        automated match to d1r2ba_
        complexed with 8gn
        has additional insertions and/or extensions that are not grouped together
    14. Domains for 5n21:
      1. 2945457Domain d5n21a_: 5n21 A: [334231]
        automated match to d1r29a_
        complexed with 8hn, cl
        has additional insertions and/or extensions that are not grouped together
      2. 2945458Domain d5n21b_: 5n21 B: [334216]
        automated match to d1r29a_
        complexed with 8hn, cl
        has additional insertions and/or extensions that are not grouped together
    15. Domain for 5x4m:
      • 2945463Domain d5x4ma1: 5x4m A:5-129 [334784]
        Other proteins in same PDB: d5x4ma2
        automated match to d1r2ba_
        complexed with 7zf
        has additional insertions and/or extensions that are not grouped together
    16. Domain for 5x4n:
      • 2945491Domain d5x4na1: 5x4n A:5-129 [334773]
        Other proteins in same PDB: d5x4na2
        automated match to d1r2ba_
        complexed with 7zl, edo
        has additional insertions and/or extensions that are not grouped together
    17. Domain for 5x4o:
      • 2945493Domain d5x4oa1: 5x4o A:5-129 [334668]
        Other proteins in same PDB: d5x4oa2
        automated match to d1r2ba_
        complexed with yam
        has additional insertions and/or extensions that are not grouped together
    18. Domain for 5x4p:
      • 2945502Domain d5x4pa1: 5x4p A:5-129 [334753]
        Other proteins in same PDB: d5x4pa2
        automated match to d1r2ba_
        complexed with 7zo
        has additional insertions and/or extensions that are not grouped together
    19. Domain for 5x4q:
      • 2945492Domain d5x4qa1: 5x4q A:5-129 [334745]
        Other proteins in same PDB: d5x4qa2
        automated match to d1r2ba_
        complexed with 7z6, edo, k
        has additional insertions and/or extensions that are not grouped together
    20. Domain for 5x9o:
      • 2945459Domain d5x9oa1: 5x9o A:5-129 [338124]
        Other proteins in same PDB: d5x9oa2
        automated match to d1r2ba_
        complexed with 80r, edo, k
        has additional insertions and/or extensions that are not grouped together
    21. Domain for 5x9p:
      • 2945485Domain d5x9pa1: 5x9p A:5-129 [338159]
        Other proteins in same PDB: d5x9pa2
        automated match to d1r2ba_
        complexed with 80l
        has additional insertions and/or extensions that are not grouped together
    22. Domains for 6c3l:
      1. 2945455Domain d6c3la_: 6c3l A: [362032]
        automated match to d1r2ba_
        complexed with egp
        has additional insertions and/or extensions that are not grouped together
      2. 2945456Domain d6c3lb_: 6c3l B: [362081]
        automated match to d1r2ba_
        complexed with egp
        has additional insertions and/or extensions that are not grouped together
    23. Domains for 6c3n:
      1. 2945504Domain d6c3na_: 6c3n A: [362029]
        automated match to d1r2ba_
        complexed with ehy
        has additional insertions and/or extensions that are not grouped together
      2. 2945505Domain d6c3nb_: 6c3n B: [362060]
        automated match to d1r2ba_
        complexed with ehy
        has additional insertions and/or extensions that are not grouped together
    24. Domains for 6cq1:
      1. 2945466Domain d6cq1a_: 6cq1 A: [366375]
        automated match to d1r2ba_
        complexed with f8j
        has additional insertions and/or extensions that are not grouped together
      2. 2945467Domain d6cq1b_: 6cq1 B: [366391]
        automated match to d1r2ba_
        complexed with f8j
        has additional insertions and/or extensions that are not grouped together
    25. Domain for 6ew6:
      • 2945453Domain d6ew6a_: 6ew6 A: [359239]
        automated match to d1r2ba_
        complexed with c0h
        has additional insertions and/or extensions that are not grouped together
    26. Domains for 6ew7:
      1. 2945460Domain d6ew7a_: 6ew7 A: [359251]
        automated match to d1r29a_
        complexed with c1w, cl
        has additional insertions and/or extensions that are not grouped together
      2. 2945461Domain d6ew7b_: 6ew7 B: [359236]
        automated match to d1r29a_
        complexed with c1w, cl
        has additional insertions and/or extensions that are not grouped together
    27. Domain for 6ew8:
      • 2945486Domain d6ew8a_: 6ew8 A: [359258]
        automated match to d1r2ba_
        complexed with c0q, cl
        has additional insertions and/or extensions that are not grouped together
    28. Domain for 6toj:
      • 2945487Domain d6toja1: 6toj A:5-129 [384331]
        Other proteins in same PDB: d6toja2
        automated match to d1r2ba_
        complexed with edo, nqq
        has additional insertions and/or extensions that are not grouped together
    29. Domain for 6tol:
      • 2945462Domain d6tola1: 6tol A:5-129 [384321]
        Other proteins in same PDB: d6tola2
        automated match to d1r2ba_
        complexed with dms, edo, nqw
        has additional insertions and/or extensions that are not grouped together
    30. Domain for 6tom:
      • 2945488Domain d6toma1: 6tom A:5-129 [384312]
        Other proteins in same PDB: d6toma2
        automated match to d1r2ba_
        complexed with edo, nqz
        has additional insertions and/or extensions that are not grouped together
    31. Domain for 6xwf:
      • 2945454Domain d6xwfa1: 6xwf A:6-127 [396474]
        Other proteins in same PDB: d6xwfa2
        automated match to d1r2ba_
        complexed with cl, mpd
        has additional insertions and/or extensions that are not grouped together
    32. Domains for 6xyx:
      1. 2945448Domain d6xyxa_: 6xyx A: [396337]
        automated match to d1r2ba_
        complexed with edo, na
        has additional insertions and/or extensions that are not grouped together
      2. 2945449Domain d6xyxb_: 6xyx B: [396366]
        automated match to d1r2ba_
        complexed with edo, na
        has additional insertions and/or extensions that are not grouped together
    33. Domains for 6y17:
      1. 2945451Domain d6y17a_: 6y17 A: [396361]
        Other proteins in same PDB: d6y17b2
        automated match to d1r2ba_
        complexed with na
        has additional insertions and/or extensions that are not grouped together
      2. 2945452Domain d6y17b1: 6y17 B:-5-127 [396401]
        Other proteins in same PDB: d6y17b2
        automated match to d1r2ba_
        complexed with na
        has additional insertions and/or extensions that are not grouped together
    34. Domain for 7bde:
    35. Domain for 7lwf:
    36. Domain for 7lzs:
    37. Domain for 7rv8:

More info for Protein B-cell lymphoma 6 (Bcl6) protein BTB domain from d.42.1.1: BTB/POZ domain

Timeline for Protein B-cell lymphoma 6 (Bcl6) protein BTB domain from d.42.1.1: BTB/POZ domain: