SCOPe 2.08: Species: Human (Homo sapiens), ubch5b [TaxId: 9606]

Lineage for Species: Human (Homo sapiens), ubch5b [TaxId: 9606]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.20: UBC-like [54494] (1 superfamily)
alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
Superfamily d.20.1: UBC-like [54495] (5 families)
Family d.20.1.1: UBC-related [54496] (7 proteins)
Protein Ubiquitin conjugating enzyme, UBC [54497] (34 species)
Species Human (Homo sapiens), ubch5b [TaxId:9606] [102841] (31 PDB entries)
Uniprot P62837
E2-17 kDa 2

PDB entries in Species: Human (Homo sapiens), ubch5b [TaxId: 9606]:

Domain(s) for 1ur6:
- Domain d1ur6a_: 1ur6 A: [99811]
  Other proteins in same PDB: d1ur6b_
  complexed with zn
Domain(s) for 1w4u:
- Domain d1w4ua_: 1w4u A: [114194]
Domain(s) for 2esk:
- Domain d2eska2: 2esk A:1-147 [132326]
  Other proteins in same PDB: d2eska3
  automated match to d1ur6a_
Domain(s) for 2eso:
- Domain d2esoa1: 2eso A:1-147 [132341]
  Other proteins in same PDB: d2esoa2
  mutant
Domain(s) for 2esp:
- Domain d2espa1: 2esp A:1-147 [132342]
  Other proteins in same PDB: d2espa2
  complexed with cl, mpd; mutant
Domain(s) for 2esq:
- Domain d2esqa1: 2esq A:1-147 [132343]
  Other proteins in same PDB: d2esqa2
  mutant
Domain(s) for 3jw0:
1. Domain d3jw0a_: 3jw0 A: [247064]
  Other proteins in same PDB: d3jw0c1, d3jw0c2, d3jw0d_, d3jw0x_, d3jw0y_
  automated match to d3a33a_
2. Domain d3jw0b_: 3jw0 B: [247065]
  Other proteins in same PDB: d3jw0c1, d3jw0c2, d3jw0d_, d3jw0x_, d3jw0y_
  automated match to d3a33a_
Domain(s) for 3l1y:
- Domain d3l1ya1: 3l1y A:1-147 [179862]
  Other proteins in same PDB: d3l1ya2
  automated match to d1ur6a_
Domain(s) for 4a49:
- Domain d4a49b_: 4a49 B: [186719]
  automated match to d1ur6a_
  complexed with k, zn
Domain(s) for 4a4b:
- Domain d4a4bc_: 4a4b C: [186720]
  automated match to d1ur6a_
  complexed with ca, zn
Domain(s) for 4a4c:
- Domain d4a4cc_: 4a4c C: [186721]
  automated match to d1ur6a_
  complexed with ca, zn
Domain(s) for 4ldt:
- Domain d4ldtc1: 4ldt C:1-147 [235347]
  Other proteins in same PDB: d4ldtb_, d4ldtc2, d4ldtd_
  automated match to d3a33a_
  complexed with edo, mg
Domain(s) for 4wz3:
- Domain d4wz3a1: 4wz3 A:1-147 [269130]
  Other proteins in same PDB: d4wz3a2
  automated match to d4ldtc_
Domain(s) for 5d0k:
1. Domain d5d0ka1: 5d0k A:1-147 [279796]
  Other proteins in same PDB: d5d0ka2, d5d0kb_, d5d0kd2, d5d0ke_, d5d0kg2, d5d0kh_, d5d0kj2, d5d0kk_
  automated match to d3tgda_
  complexed with zn
2. Domain d5d0kd1: 5d0k D:1-147 [279801]
  Other proteins in same PDB: d5d0ka2, d5d0kb_, d5d0kd2, d5d0ke_, d5d0kg2, d5d0kh_, d5d0kj2, d5d0kk_
  automated match to d3tgda_
  complexed with zn
3. Domain d5d0kg1: 5d0k G:1-147 [279798]
  Other proteins in same PDB: d5d0ka2, d5d0kb_, d5d0kd2, d5d0ke_, d5d0kg2, d5d0kh_, d5d0kj2, d5d0kk_
  automated match to d3tgda_
  complexed with zn
4. Domain d5d0kj1: 5d0k J:1-147 [279803]
  Other proteins in same PDB: d5d0ka2, d5d0kb_, d5d0kd2, d5d0ke_, d5d0kg2, d5d0kh_, d5d0kj2, d5d0kk_
  automated match to d3tgda_
  complexed with zn
Domain(s) for 5d0m:
- Domain d5d0ma_: 5d0m A: [279797]
  Other proteins in same PDB: d5d0mb_
  automated match to d3tgda_
  complexed with po4, zn
Domain(s) for 5d1k:
- Domain d5d1ka_: 5d1k A: [278585]
  automated match to d1ur6a_
  complexed with edo, oxl, peg, zn
Domain(s) for 5d1l:
- Domain d5d1la_: 5d1l A: [278584]
  automated match to d1ur6a_
  complexed with oxl, peg, zn
Domain(s) for 5d1m:
- Domain d5d1ma_: 5d1m A: [278586]
  automated match to d1ur6a_
  complexed with edo, oxl, peg, zn
Domain(s) for 5mnj:
1. Domain d5mnja_: 5mnj A: [334869]
  Other proteins in same PDB: d5mnjb_, d5mnjf_
  automated match to d2clwa_
  complexed with so4, zn
2. Domain d5mnje_: 5mnj E: [334870]
  Other proteins in same PDB: d5mnjb_, d5mnjf_
  automated match to d2clwa_
  complexed with so4, zn
Domain(s) for 5ulf:
1. Domain d5ulfa1: 5ulf A:1-147 [335198]
  Other proteins in same PDB: d5ulfa2, d5ulfb_, d5ulfc2, d5ulfd_
  automated match to d2clwa_
  complexed with gol
2. Domain d5ulfc1: 5ulf C:1-147 [335216]
  Other proteins in same PDB: d5ulfa2, d5ulfb_, d5ulfc2, d5ulfd_
  automated match to d2clwa_
  complexed with gol
Domain(s) for 5ulh:
- Domain d5ulha1: 5ulh A:1-147 [335286]
  Other proteins in same PDB: d5ulha2, d5ulhb_, d5ulhc_
  automated match to d2clwa_
  complexed with gol, scn, zn
Domain(s) for 5ulk:
- Domain d5ulka_: 5ulk A: [335274]
  Other proteins in same PDB: d5ulkb_, d5ulkc_
  automated match to d2clwa_
  complexed with zn
Domain(s) for 5vzw:
1. Domain d5vzwa_: 5vzw A: [337734]
  Other proteins in same PDB: d5vzwc1, d5vzwc2, d5vzwd1, d5vzwd2
  automated match to d2clwa_
  complexed with zn
2. Domain d5vzwb_: 5vzw B: [337599]
  Other proteins in same PDB: d5vzwc1, d5vzwc2, d5vzwd1, d5vzwd2
  automated match to d2clwa_
  complexed with zn
Domain(s) for 6hpr:
- Domain d6hprc_: 6hpr C: [361127]
  Other proteins in same PDB: d6hprb_, d6hprd_
  automated match to d2clwa_
  complexed with zn
Domain(s) for 6m2c:
1. Domain d6m2ca1: 6m2c A:1-147 [402419]
  Other proteins in same PDB: d6m2ca2, d6m2cb2, d6m2cc2, d6m2cd2
  automated match to d2clwa_
  complexed with zn
2. Domain d6m2cb1: 6m2c B:1-147 [402509]
  Other proteins in same PDB: d6m2ca2, d6m2cb2, d6m2cc2, d6m2cd2
  automated match to d2clwa_
  complexed with zn
3. Domain d6m2cc1: 6m2c C:1-147 [402431]
  Other proteins in same PDB: d6m2ca2, d6m2cb2, d6m2cc2, d6m2cd2
  automated match to d2clwa_
  complexed with zn
4. Domain d6m2cd1: 6m2c D:1-147 [402444]
  Other proteins in same PDB: d6m2ca2, d6m2cb2, d6m2cc2, d6m2cd2
  automated match to d2clwa_
  complexed with zn
Domain(s) for 6sqo:
1. Domain d6sqob_: 6sqo B: [385036]
  Other proteins in same PDB: d6sqoc1, d6sqoc2, d6sqof1, d6sqof2
  automated match to d4v3ka_
  complexed with cl, no3, zn
2. Domain d6sqoe_: 6sqo E: [385048]
  Other proteins in same PDB: d6sqoc1, d6sqoc2, d6sqof1, d6sqof2
  automated match to d4v3ka_
  complexed with cl, no3, zn
Domain(s) for 6sqr:
1. Domain d6sqrb_: 6sqr B: [385055]
  Other proteins in same PDB: d6sqrc1, d6sqrc2, d6sqrf1, d6sqrf2, d6sqri_, d6sqrl1, d6sqrl2
  automated match to d4v3ka_
  complexed with edo, no3, zn
2. Domain d6sqre_: 6sqr E: [385063]
  Other proteins in same PDB: d6sqrc1, d6sqrc2, d6sqrf1, d6sqrf2, d6sqri_, d6sqrl1, d6sqrl2
  automated match to d4v3ka_
  complexed with edo, no3, zn
3. Domain d6sqrh_: 6sqr H: [385035]
  Other proteins in same PDB: d6sqrc1, d6sqrc2, d6sqrf1, d6sqrf2, d6sqri_, d6sqrl1, d6sqrl2
  automated match to d4v3ka_
  complexed with edo, no3, zn
4. Domain d6sqrk_: 6sqr K: [385054]
  Other proteins in same PDB: d6sqrc1, d6sqrc2, d6sqrf1, d6sqrf2, d6sqri_, d6sqrl1, d6sqrl2
  automated match to d4v3ka_
  complexed with edo, no3, zn
Domain(s) for 6sqs:
1. Domain d6sqsb_: 6sqs B: [385034]
  Other proteins in same PDB: d6sqsc1, d6sqsc2, d6sqsf1, d6sqsf2
  automated match to d4v3ka_
  complexed with sep, zn
2. Domain d6sqse_: 6sqs E: [385040]
  Other proteins in same PDB: d6sqsc1, d6sqsc2, d6sqsf1, d6sqsf2
  automated match to d4v3ka_
  complexed with sep, zn
Domain(s) for 6w7z:
- Domain d6w7za1: 6w7z A:1-147 [386006]
  Other proteins in same PDB: d6w7za2
  automated match to d2clwa_
  complexed with gol, zn
Domain(s) for 6w9d:
1. Domain d6w9da1: 6w9d A:2-147 [385940]
  Other proteins in same PDB: d6w9da2, d6w9dc_, d6w9dd2, d6w9df_, d6w9dg2, d6w9di_
  automated match to d5d0ma_
  complexed with iod, zn
2. Domain d6w9dd1: 6w9d D:2-147 [385945]
  Other proteins in same PDB: d6w9da2, d6w9dc_, d6w9dd2, d6w9df_, d6w9dg2, d6w9di_
  automated match to d5d0ma_
  complexed with iod, zn
3. Domain d6w9dg1: 6w9d G:1-147 [385933]
  Other proteins in same PDB: d6w9da2, d6w9dc_, d6w9dd2, d6w9df_, d6w9dg2, d6w9di_
  automated match to d5d0ma_
  complexed with iod, zn
Domain(s) for 7bol:
- Domain d7bola1: 7bol A:1-147 [401804]
  Other proteins in same PDB: d7bola2
  automated match to d2clwa_

More info for Species Human (Homo sapiens), ubch5b [TaxId:9606] from d.20.1.1 Ubiquitin conjugating enzyme, UBC

Timeline for Species Human (Homo sapiens), ubch5b [TaxId:9606] from d.20.1.1 Ubiquitin conjugating enzyme, UBC:

Species Human (Homo sapiens), ubch5b [TaxId:9606] from d.20.1.1 Ubiquitin conjugating enzyme, UBC first appeared in SCOP 1.67
Species Human (Homo sapiens), ubch5b [TaxId:9606] from d.20.1.1 Ubiquitin conjugating enzyme, UBC appears in SCOPe 2.07