Lineage for Family c.77.1.3: PdxA-like

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.77: Isocitrate/Isopropylmalate dehydrogenase-like [53658] (1 superfamily)
    consists of two intertwined (sub)domains related by pseudo dyad; duplication
    3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest
  4. Superfamily c.77.1: Isocitrate/Isopropylmalate dehydrogenase-like [53659] (6 families) (S)
    the constituent families form similar dimers
  5. Family c.77.1.3: PdxA-like [102656] (2 proteins)
    Pfam PF04166; contains extra beta-alpha unit between strands 2 and 3; closer relationships to the PlsX-like and phosphotransacetylase families

Proteins:

  1. 4-hydroxythreonine-4-phosphate dehydrogenase PdxA [102657] (2 species)
    pyridoxal phosphate biosynthetic protein
    1. Species Escherichia coli [TaxId:562] [102658] (3 PDB entries)
    2. Species Salmonella typhimurium [TaxId:90371] [102659] (1 PDB entry)
  2. automated matches [190842] (2 species)
    not a true protein
    1. Species Pseudomonas aeruginosa [TaxId:287] [188158] (1 PDB entry)
    2. Species Yersinia pestis [TaxId:632] [189268] (1 PDB entry)

More info for Family c.77.1.3: PdxA-like

Timeline for Family c.77.1.3: PdxA-like: