Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2130990Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2130991Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2132106Family c.67.1.6: Pyridoxal-dependent decarboxylase [69565] (4 protein domains)
    automatically mapped to Pfam PF00282
  6. 2132117Protein Glutamate decarboxylase beta, GadB [102596] (2 species)
  7. 2132137Species Escherichia coli [TaxId:562] [102597] (5 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1pmm:
    1. 2132138Domain d1pmma_: 1pmm A: [94901]
      complexed with acy, plp
    2. 2132139Domain d1pmmb_: 1pmm B: [94902]
      complexed with acy, plp
    3. 2132140Domain d1pmmc_: 1pmm C: [94903]
      complexed with acy, plp
    4. 2132141Domain d1pmmd_: 1pmm D: [94904]
      complexed with acy, plp
    5. 2132142Domain d1pmme_: 1pmm E: [94905]
      complexed with acy, plp
    6. 2132143Domain d1pmmf_: 1pmm F: [94906]
      complexed with acy, plp
  2. Domain(s) for 1pmo:
    1. 2132156Domain d1pmoa_: 1pmo A: [94908]
      complexed with plr, trs
    2. 2132157Domain d1pmob_: 1pmo B: [94909]
      complexed with plr, trs
    3. 2132158Domain d1pmoc_: 1pmo C: [94910]
      complexed with plr, trs
    4. 2132159Domain d1pmod_: 1pmo D: [94911]
      complexed with plr, trs
    5. 2132160Domain d1pmoe_: 1pmo E: [94912]
      complexed with plr, trs
    6. 2132161Domain d1pmof_: 1pmo F: [94913]
      complexed with plr, trs
  3. Domain(s) for 2dgk:
    1. 2132144Domain d2dgka_: 2dgk A: [163631]
      automated match to d1pmoa_
      complexed with edo, plp, so4; mutant
    2. 2132145Domain d2dgkb_: 2dgk B: [163632]
      automated match to d1pmoa_
      complexed with edo, plp, so4; mutant
    3. 2132146Domain d2dgkc_: 2dgk C: [163633]
      automated match to d1pmoa_
      complexed with edo, plp, so4; mutant
    4. 2132147Domain d2dgkd_: 2dgk D: [163634]
      automated match to d1pmoa_
      complexed with edo, plp, so4; mutant
    5. 2132148Domain d2dgke_: 2dgk E: [163635]
      automated match to d1pmoa_
      complexed with edo, plp, so4; mutant
    6. 2132149Domain d2dgkf_: 2dgk F: [163636]
      automated match to d1pmoa_
      complexed with edo, plp, so4; mutant
  4. Domain(s) for 2dgl:
    1. 2132162Domain d2dgla_: 2dgl A: [131502]
      automated match to d3fz7f_
      complexed with acy, br, plp
    2. 2132163Domain d2dglb_: 2dgl B: [131503]
      automated match to d3fz7f_
      complexed with acy, br, plp
    3. 2132164Domain d2dglc_: 2dgl C: [131504]
      automated match to d3fz7f_
      complexed with acy, br, plp
    4. 2132165Domain d2dgld_: 2dgl D: [131505]
      automated match to d3fz7f_
      complexed with acy, br, plp
    5. 2132166Domain d2dgle_: 2dgl E: [131506]
      automated match to d3fz7f_
      complexed with acy, br, plp
    6. 2132167Domain d2dglf_: 2dgl F: [131507]
      automated match to d3fz7f_
      complexed with acy, br, plp
  5. Domain(s) for 2dgm:
    1. 2132150Domain d2dgma_: 2dgm A: [131508]
      automated match to d1pmob_
      complexed with acy, fmt, iod, peg, plp
    2. 2132151Domain d2dgmb_: 2dgm B: [131509]
      automated match to d1pmob_
      complexed with acy, fmt, iod, peg, plp
    3. 2132152Domain d2dgmc_: 2dgm C: [131510]
      automated match to d1pmob_
      complexed with acy, fmt, iod, peg, plp
    4. 2132153Domain d2dgmd_: 2dgm D: [131511]
      automated match to d1pmob_
      complexed with acy, fmt, iod, peg, plp
    5. 2132154Domain d2dgme_: 2dgm E: [131512]
      automated match to d1pmob_
      complexed with acy, fmt, iod, peg, plp
    6. 2132155Domain d2dgmf_: 2dgm F: [131513]
      automated match to d1pmob_
      complexed with acy, fmt, iod, peg, plp

More info for Species Escherichia coli [TaxId:562] from c.67.1.6 Glutamate decarboxylase beta, GadB

Timeline for Species Escherichia coli [TaxId:562] from c.67.1.6 Glutamate decarboxylase beta, GadB: